| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_66456 |
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| Symbol | CCT4 |
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| ID | 4851351 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | - |
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| Start bp | 1565854 |
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| End bp | 1567610 |
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| Gene Length | 1757 bp |
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| Protein Length | 533 aa |
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| Translation table | |
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| GC content | 44% |
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| IMG OID | 640393059 |
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| Product | T-complex protein 1, delta subunit (TCP-1-delta) (CCT-delta) |
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| Protein accession | XP_001387945 |
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| Protein GI | 126274392 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0459] Chaperonin GroEL (HSP60 family) |
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| TIGRFAM ID | [TIGR02342] T-complex protein 1, delta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTGTTAA TTTGTCTGTA AGAATAAAAG ATACACAGTC TGAAGTGTAG AGCTAGAAAT
CGCTAATTCT CGAAGTCACA CAATTTCAAA GTTCAATTCA AAGTCAAATT CTCAAGCAAT
TCTCAAACTT TTCACTTATC ATATCCATTC ACACCATGTC TGCCCAAGTA GCCCCACTCG
TGGCTCCATC CAACGCCACT TTCAAAGACA AGGAAAAGCC GCAAGAAGTC AGAAAGGCAA
ACATCCTCGC TGCGCGTGCC GTATCCGATG CCATCAGAAC ATCGTTGGGC CCCAAAGGAA
TGGATAAAAT GATCCGCACC AAGACAGGCG AAATCATCAT CTCTAACGAC GGTGCTACTA
TATTGAAACA CATGGCTGTT CTCCACCCAG CTGCCAGAAT GTTGGTGGAT GTAAGTGCAG
CCCAGGATGT AGAAGCTGGT GATGGAACCA CATCTGTAGC CATCTTGACG GGTTCCTTGT
TGGGAGCTGC TGATAGATTG TTGAATAAAG GTATCCACCC TACGTTGATT GCCGAGTCCT
TCCAGCGTGC AGCTCACAGA GCAACCGAAG TCTTGTTGGA CATGTCGACT AAAATTTCTC
TTGATGACAG AGAGCAGTTG ATTCGCGCTG CATCCACTTC GTTATCGCTG AAGATTGTAT
CCCAATTCTC GTCATTTTTG TCACCTTTGG CTGTAGACTC TGTGCTTAAA GTGATTAACG
AAGAAGGTAA CAATGTAGAC TTGAATGACA TCAGATTGAT CAAGAAAGTA GGTGGTACTA
TCGATGAGAC CGAGCTAGTC AGTGGTGTTG TCTTGACCCA GAATGTAGTC AAGAACGCTG
GCGGACCTAC CAGAATAGAG AAGGCACGCA TCGGCTTAGT TCAGTTCCAG ATATCGCCTC
CTAAGCCTGA TATGGAGAAC AATGTGGTAG TAAATGACTA CAGACAAATG GACAAGATCT
TAAAAGAAGA AAGAGCGTAC TTGTTGAACA TCTGCAAGAA GATCAAGAAG TCCAAGTGTA
ATGTGCTATT GATCCAGAAG TCGATCTTGA GAGACGCTGT CAATGACTTG GCTCTCCATT
TTCTTTCAAA GTTGAACATC TTGGTAGTAA AGGACATCGA GAGAGACGAA ATAGAGTTCT
TGGCCAAGTC TACCGGTTGT AAGCCCATTG CTGACATCGA CAACTTCACC GAGGACAGAC
TAGGTTCAGC TGATCTTGTA GAAGAAATCG AAAGTTCGGG CTCCAAGATT GTCAAGATCA
CAGGCATAAC TTCAAAAAAC ATAAAACCTA CTGTTTCTGT CATCGTCAGA GGAGCCAACC
ACTTGGTTTT AGACGAAGCT GAAAGATCTA TCCATGATGC ATTGTGTGTT GTGAGATGTT
TGGTCAAGGA AAAGGCTCTC ATTGCTGGTG GAGGTGCCCC AGAAGTTGAA GTGTCTCGAA
TTTTGACCAA GGAAGCCACC AAATTGTCTG GTGTTGAGCA GTTTGTCTAC CAGGAATTTG
CTCAAGCTTT AGAAGTGATT CCTACCACTT TAGCCGAAAA TGCTGGTTTG AATCCAATCA
ATGTCGTTAC CGACTTGAGA AACAGACACG AAAATGGTGA AAAGAATGCC GGTATTTCTG
TCAGAAGATC CGGTGCTTCC AACACATATG ACGAACATGT GTTGCAACCA GTTTTGGTCA
GCACCAGTGC CATCTCGTTG GCAGCTGAAT GCGTCAAGTC CATCTTGAGA ATTGACGATA
TCCAATTCAG TCGTTAA
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| Protein sequence | MSAQVAPLVA PSNATFKDKE KPQEVRKANI LAARAVSDAI RTSLGPKGMD KMIRTKTGEI
IISNDGATIL KHMAVLHPAA RMLVDVSAAQ DVEAGDGTTS VAILTGSLLG AADRLLNKGI
HPTLIAESFQ RAAHRATEVL LDMSTKISLD DREQLIRAAS TSLSLKIVSQ FSSFLSPLAV
DSVLKVINEE GNNVDLNDIR LIKKVGGTID ETELVSGVVL TQNVVKNAGG PTRIEKARIG
LVQFQISPPK PDMENNVVVN DYRQMDKILK EERAYLLNIC KKIKKSKCNV LLIQKSILRD
AVNDLALHFL SKLNILVVKD IERDEIEFLA KSTGCKPIAD IDNFTEDRLG SADLVEEIES
SGSKIVKITG ITSKNIKPTV SVIVRGANHL VLDEAERSIH DALCVVRCLV KEKALIAGGG
APEVEVSRIL TKEATKLSGV EQFVYQEFAQ ALEVIPTTLA ENAGLNPINV VTDLRNRHEN
GEKNAGISVR RSGASNTYDE HVLQPVLVST SAISLAAECV KSILRIDDIQ FSR
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