| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_64926 |
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| Symbol | PDC1 |
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| ID | 4851417 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | + |
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| Start bp | 1765715 |
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| End bp | 1767920 |
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| Gene Length | 2206 bp |
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| Protein Length | 596 aa |
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| Translation table | |
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| GC content | 44% |
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| IMG OID | 640393125 |
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| Product | pyruvate decarboxylase |
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| Protein accession | XP_001387569 |
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| Protein GI | 126274545 |
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| COG category | [G] Carbohydrate transport and metabolism
[H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG3961] Pyruvate decarboxylase and related thiamine pyrophosphate-requiring enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.99262 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.284292 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | CCGAATTCGA ATTCAGGGAT AAAGTATATA AAGGCCATTG GATCCTGGGA GGTTCGTCCC
AGACATTTGG TTTTGTTCTC CATCACAATC CAGATTTGAT CAATTGACTA CAATTAACAG
AGTCTAGCCC TCCCGTATCC GGAAAAGCCT CTTCTCTGAG ATCGACTCAA TTGACTTGAA
TAATATTTCA AAATATAAGA GCTTACTGCG AATCCCCCCA TCCCCCAAAA AAGCCGCCTA
ACATACAACT ATCATGGCTG AAGTCTCATT AGGAAGATAT CTCTTCGAGA GATTGTACCA
ATTGCAAGTG CAGACCATCT TCGGTGTCCC TGGTGATTTC AACTTGTCGC TTTTGGACAA
GATCTACGAA GTGGAAGATG CCCATGGCAA GAATTCGTTT AGATGGGCTG GTAATGCCAA
CGAATTGAAT GCATCGTACG CTGCTGACGG TTACTCGAGA GTCAAGCGTT TAGGGTGTTT
GGTCACTACC TTTGGTGTCG GTGAATTGTC TGCTTTGAAT GGTATTGCCG GTTCTTATGC
CGAACATGTT GGTTTGCTTC ATGTCGTAGG TGTTCCATCG ATTTCCTCGC AAGCTAAGCA
ATTGTTACTT CACCACACTT TGGGTAATGG TGATTTCACT GTTTTCCATA GAATGTCCAA
CAACATTTCT CAGACCACAG CCTTTATCTC CGATATCAAC TCGGCTCCAG CTGAAATTGA
TAGATGTATC AGAGAGGCCT ACGTCAAACA AAGACCAGTT TATATCGGGT TACCAGCTAA
CTTAGTTGAT TTGAATGTTC CGGCCTCTTT GCTTGAGTCT CCAATCAACT TGTCGTTGGA
AAAGAACGAC CCAGAGGCTC AAGATGAAGT CATTGACTCT GTCTTAGACT TGATCAAAAA
GTCGCTGAAC CCAATCATCT TGGTCGATGC CTGTGCCTCG AGACATGACT GTAAGGCTGA
AGTTACTCAG TTGATTGAAC AAACCCAATT CCCAGTATTT GTCACTCCAA TGGGTAAAGG
TACCGTTGAT GAGGGTGGTG TAGACGGAGA ATTGTTAGAA GATGATCCTC ATTTGATTGC
CAAGGTCGCT GCTAGGTTGT CTGCTGGCAA GAACGCTGCC TCTAGATTCG GAGGTGTTTA
TGTCGGAACC TTGTCGAAGC CCGAAGTCAA GGACGCTGTA GAGAGTGCAG ATTTGATTTT
GTCTGTCGGT GCCCTTTTGT CTGATTTCAA CACTGGTTCA TTTTCCTACT CCTACAGAAC
CAAGAACATC GTCGAATTCC ATTCTGATTA CACTAAGATT AGACAAGCCA CTTTCCCAGG
TGTGCAGATG AAGGAAGCCT TGCAAGAATT GAACAAGAAA GTTTCATCTG CTGCTAGTCA
CTATGAAGTC AAGCCTGTGC CCAAGATCAA GTTGGCCAAT ACACCAGCCA CCAGAGAAGT
CAAGTTAACT CAGGAATGGT TGTGGACCAG AGTGTCTTCG TGGTTCAGAG AAGGTGATAT
TATTATCACC GAAACCGGTA CATCCTCCTT CGGTATAGTT CAATCCAGAT TCCCAAACAA
CACCATCGGT ATCTCCCAAG TATTGTGGGG TTCTATTGGT TTCTCTGTTG GTGCCACTTT
GGGTGCTGCC ATGGCTGCCC AAGAACTCGA CCCTAACAAG AGAACCATCT TGTTTGTTGG
AGATGGTTCT TTGCAATTGA CCGTTCAGGA AATCTCCACC ATGATCAGAT GGGGTACCAC
ACCTTACCTT TTCGTGTTGA ACAATGACGG TTACACCATC GAGCGTTTGA TCCACGGTGT
AAATGCCTCA TATAATGACA TCCAACCATG GCAAAACTTG GAAATCTTGC CTACTTTCTC
GGCCAAGAAC TACGACGCTG TGAGAATCTC CAACATCGGA GAAGCAGAAG ATATCTTGAA
AGACAAGGAA TTCGGAAAGA ACTCCAAGAT TAGATTGATA GAAGTCATGT TACCAAGATT
GGATGCACCA TCTAACCTTG CCAAACAAGC TGCCATTACA GCTGCCACCA ACGCCGAAGC
TTAGTAAAAA GGATTAGTGT TATTTTTTTG CACCCACGTT ATATATATTA ATGCACAACT
ATGAGAGACA ATTCCGTAGT AAACGAGGAC GCTTTTCTTT CAGATAAACT GCATTTTGTC
TATCCGACAG ATTTCGTATT TCATACGGCT TTGGCATAAA TGCTCG
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| Protein sequence | MAEVSLGRYL FERLYQLQVQ TIFGVPGDFN LSLLDKIYEV EDAHGKNSFR WAGNANELNA
SYAADGYSRV KRLGCLVTTF GVGELSALNG IAGSYAEHVG LLHVVGVPSI SSQAKQLLLH
HTLGNGDFTV FHRMSNNISQ TTAFISDINS APAEIDRCIR EAYVKQRPVY IGLPANLVDL
NVPASLLESP INLSLEKNDP EAQDEVIDSV LDLIKKSLNP IILVDACASR HDCKAEVTQL
IEQTQFPVFV TPMGKGTVDE GGVDGELLED DPHLIAKVAA RLSAGKNAAS RFGGVYVGTL
SKPEVKDAVE SADLILSVGA LLSDFNTGSF SYSYRTKNIV EFHSDYTKIR QATFPGVQMK
EALQELNKKV SSAASHYEVK PVPKIKLANT PATREVKLTQ EWLWTRVSSW FREGDIIITE
TGTSSFGIVQ SRFPNNTIGI SQVLWGSIGF SVGATLGAAM AAQELDPNKR TILFVGDGSL
QLTVQEISTM IRWGTTPYLF VLNNDGYTIE RLIHGVNASY NDIQPWQNLE ILPTFSAKNY
DAVRISNIGE AEDILKDKEF GKNSKIRLIE VMLPRLDAPS NLAKQAAITA ATNAEA
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