| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_64832 |
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| Symbol | CBF5 |
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| ID | 4851096 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | - |
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| Start bp | 918375 |
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| End bp | 919988 |
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| Gene Length | 1614 bp |
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| Protein Length | 475 aa |
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| Translation table | |
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| GC content | 45% |
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| IMG OID | 640392804 |
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| Product | nucleolar pseuduridine synthase and putative microtubule binding protein |
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| Protein accession | XP_001387815 |
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| Protein GI | 126274082 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0130] Pseudouridine synthase |
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| TIGRFAM ID | [TIGR00425] rRNA pseudouridine synthase, putative
[TIGR00431] tRNA pseudouridine 55 synthase
[TIGR00451] uncharacterized domain 2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATTCGTAGAA CACCACCACC ATGTCCGACG AATACTTCAT CAAGCCAGAG GCTGTCTCTC
CATCTAACGA CACCTCCGAG TGGCCTTTGT TGTTGAAGAA CTTCGACAAG CTTCTTGTGA
GATCTGGACA CTATACTCCC ATTCCTTCAG GCTCTTCTCC CTTGAAGAGA GACATCAAGT
CATACATCTC GTCTGGTGTA ATTAACTTGG ACAAGCCTTC CAACCCATCT TCCCACGAGG
TTGTTGCATG GATTAAGCGT ATCTTGCGTT CGGAAAAGAC TGGTCACTCT GGTACTTTGG
ATCCCAAAGT CACAGGATGT CTTATTGTCT GTATCGACAG AGCTACCAGA TTGGTCAAGT
CCCAGCAGGG TGCTGGTAAG GAGTATGTGT GTATAGTGAG ATTGCACGAA GAATTGAAGG
ATGCTAAAGA TTTGGGACGT TCTCTTGAAA ACTTGACCGG TGCTCTTTTC CAAAGACCAC
CATTGATTTC TGCTGTTAAG AGACAGTTGA GAGTGAGAAC TATCTACGAC TCGAACTTGA
TTGAGTTCGA CAACAAACGT GGTTTGGGTG TCTTTTGGGC CTCTTGTGAA GCAGGAACCT
ACATGAGAAC GTTGTGTGTC CATTTAGGAA TGTTGTTGGG TGTTGGAGGT CACATGCAAG
AGTTGCGTCG TGTTCGTTCG GGTGCTCTTG GAGAGAATGA CAACTTGGTC ACCTTGCACG
ATGTCTTGGA TGCTCAATAC GTCTATGACA ACACACGTGA CGAGTCTTAC TTGAGAAAGA
TTATTCAGCC ATTGGAAACT CTCTTGGTAG GCTACAAGCG TATTGTTGTG AAGGACTCAG
CTGTCAACTC TGTCTGTTAT GGTGCAAAGT TGATGATCCC TGGTTTGTTG CGTTACGAGG
AGGGCATTGA ATTATATGAC GAGGTCGTCT TAATGACCAC CAAGGGTGAA GCCATTGCCA
TTGGTATTGC CCAGATGACC ACTGTAGACT TGCAGGGCTG TGACCACGGT GTCGTCGCCA
AGGTCAAGAG ATGTATCATG GAACGTGACA CCTACCCAAG AAGATGGGGA CTTGGCCCAG
TGGCCCAAAA GAAGAAGCAA ATGAAGGCAG ATGGCAAGTT GGACAAATTT GGCAGAGCCA
ATGAAAACAC TCCAGAGACC TGGAAGCAAG AATACAAGGA CCACGACGAA GAACCTGCCC
CTGCTGTGCC TGCCTCCAAA TTGGTGGCTC CTGAAGTGCA ACTCCCAAAG AAGACCTTAA
TCGAAGAAGT CGCTTCTGAA GAGGCTTCTG AAGCCGAAGA AAAGAAGGAG GACAAGAAGG
AAAAGAAGGA GAAGAAGGAA AAGAAGGAGA AGAAGGACAA GAAGGAAAAG AAGGACAAGA
AGGACAAGAA GAGAAAGGCT GAAGACGGTG AAGAAAAGGC CGAAAAGAAG AAGAAGGCCA
AGAAGTAGTT GCATTTCATA TTACCATAAC CAACATCACA ATACCATCAT TCCATTCCCG
TCGCAATGGT GTATTCTACA AGGTACTCAA CGCCGTTTGT TTTACCTTTA GCATTAGTTC
TGTACATTTA ATTTTTCTAT ATATGATTTT AACCAATAAC TTTAGATGAC GTTG
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| Protein sequence | MSDEYFIKPE AVSPSNDTSE WPLLLKNFDK LLVRSGHYTP IPSGSSPLKR DIKSYISSGV
INLDKPSNPS SHEVVAWIKR ILRSEKTGHS GTLDPKVTGC LIVCIDRATR LVKSQQGAGK
EYVCIVRLHE ELKDAKDLGR SLENLTGALF QRPPLISAVK RQLRVRTIYD SNLIEFDNKR
GLGVFWASCE AGTYMRTLCV HLGMLLGVGG HMQELRRVRS GALGENDNLV TLHDVLDAQY
VYDNTRDESY LRKIIQPLET LLVGYKRIVV KDSAVNSVCY GAKLMIPGLL RYEEGIELYD
EVVLMTTKGE AIAIGIAQMT TVDLQGCDHG VVAKVKRCIM ERDTYPRRWG LGPVAQKKKQ
MKADGKLDKF GRANENTPET WKQEYKDHDE EPAPAVPASK LVAPEVQLPK KTLIEEVASE
EASEAEEKKE DKKEKKEKKE KKEKKDKKEK KDKKDKKRKA EDGEEKAEKK KKAKK
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