| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_53602 |
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| Symbol | RPB5 |
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| ID | 4851905 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | + |
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| Start bp | 3149436 |
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| End bp | 3150186 |
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| Gene Length | 751 bp |
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| Protein Length | 213 aa |
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| Translation table | |
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| GC content | 41% |
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| IMG OID | 640393613 |
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| Product | DNA-directed RNA polymerases II 24 kDa polypeptide (RNA polymerase II subunit 5) |
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| Protein accession | XP_001386931 |
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| Protein GI | 126275976 |
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| COG category | [K] Transcription |
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| COG ID | [COG2012] DNA-directed RNA polymerase, subunit H, RpoH/RPB5 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0000357344 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAGACG ACAGAACTGT ATCTCGTTTG TTCAGGTCTT TCAAGACAGT TAAGGAGATG
GTCAGAGACA GAGTAAGTAT TTGAAGAAAT CGAAATTTCG AAATTTTGTG AACTGAAAAA
TTCATTACAT GAAATTCACA AAATAATATG TCTCACGCTA GAAATACTAA CATCTTTCCA
GGGCTACTAT ATCACCCAGG AGGAAGTAGA CATGTCTTTG GACGAGTTCA GGGCAAAGAT
CTGTGATTCT ATGGGCAGAC CACAGAGGAA GTTGATGTGT TTCCAAGCTA ATCCTACTGC
TGAGTCGTTG GATAAGTTCC CAGACTTGGG TTCATTATGG GTCGAATTCT GTGATGAAGC
TTCTGTGGGT ATCAAGACTA TGAGAAATTT CTGTATCCAC ATCAGTGAAA AGAACTTCAG
CACTGGTATA TTCATCTACC AGAACTCGAT AACTCCTTCT GCCAACAAGT TGATCCCCAC
TGTTTCTCCT GCATCCATAG AAACATTCCA AGAAGGGGAT TTGGTGGTCA ACATCACCCA
CCACGAGTTA GTTCCTAAAC ATATCAAGTT ATCGAGAGAC GAAAAGAAGG AATTGTTAGA
CAGATACAGA TTGAAGGAGT CGCAGTTGCC TAGAGTCCAG AGAGAAGATC CTGTGGCCAG
ATACTTGGGA TTGAAGAGAG GAGAAGTAGT AAAAATCATT AGAAGATCAG AAACGTCTGG
TCGTTATGCA TCGTACAGAA TCTGTTTGTG A
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| Protein sequence | MEDDRTVSRL FRSFKTVKEM VRDRGYYITQ EEVDMSLDEF RAKICDSMGR PQRKLMCFQA
NPTAESLDKF PDLGSLWVEF CDEASVGIKT MRNFCIHISE KNFSTGIFIY QNSITPSANK
LIPTVSPASI ETFQEGDLVV NITHHELVPK HIKLSRDEKK ELLDRYRLKE SQLPRVQRED
PVARYLGLKR GEVVKIIRRS ETSGRYASYR ICL
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