Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_53466 |
Symbol | PTM6 |
ID | 4851605 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009068 |
Strand | - |
Start bp | 2307684 |
End bp | 2309921 |
Gene Length | 2238 bp |
Protein Length | 745 aa |
Translation table | |
GC content | 38% |
IMG OID | 640393313 |
Product | protein mannosyltransferase |
Protein accession | XP_001387014 |
Protein GI | 126275012 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1928] Dolichyl-phosphate-mannose--protein O-mannosyl transferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000125318 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.117145 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GAATATAGGC ATTTATCAAA TAGAAAGAAT CAAGAATCAC AAAACGAGAA AATCTTGGAA GAAATAATTT CTAAGACAGA ATCTTTATCC ATTAGTTCTC ATGATAACCA TGCCAGTATT TCCAGGGTCT TCACTATGTA CATAAATCCT TTGGTGTTGA CAGCCTTATC CGCATTTGTG CGATTGTATC GTATAGATGC ATCGAATAAA GTGCTATGGG ATGAAGCTCA TTTTGGCAAG TTTGGTTCCT ACTACTTGAA GCATGAATTC TACTTCGATG TTCACCCTCC GTTAGGAAAG TTACTAGTTG GTTTATCTGG TTACTTGTCA GGCTATGATG GAAATTTTCT GTTTGACAGT GGAATAGAGT ATGGTGATAA TTGCAACTAC GTAATGATGA GATGCTTCAA TTGTATGTTC AGTATATTGT GTACCCCAAT TGCTTACAAG ACTTCCGAGT CACTTGGCTT TAGCCAATTG ACTACCTGGT TTATTTGTTT ACTGGTTATT TTTGAGATGA TATCATTGAC ATTGTCAAAA TTTATTCTTT TGGACTCCAT GTTACTCTTC TTTACAATGT TGGCTTTTTA CTGCTTAGTG AATGTTCACA ATGCTAGAGT GAAGAATCGG CTACTTTCGC GACAAGGAAC AAAAGCTCTA ATACTCACTG GATTTTCAAT TGGATGTGTG TGTTCTGTAA AGTGGGTCGG ACTATTCGTA ACTTCTGTTA TTGGTCTCTA CATTATTTAC GATTTATTGA TTAAGTTCTA CCAACTAATA TCTACGGACC AACTTGGACT CAAAGAATAT ATTTTTCATT GGATTTCGAG AATATTAACT TTAATAATAT ACCCGTTTGT AATTTATTTG CTATGCTTCA AAATCCATTT CTTAGTGCTC AACCACTCTG GTCCAGGAGA TGGGTCTATA TCCACATTAT TGCAGGCATC ATTGGAAGGA AATAAGATTA AGCAAGGCCC ACGATCGGTT GCCTTCGACT CACTTGTTAC ACTTAGATCT CAGGGCCTCT CCCCCAATTT ACTTCATTCA CATGATCATT CTTATCCAGA AGGTTCGCAA TTGCAACAGA TAACAACGTA CGGCTTCAAG GACGACAATA ATGATTTCGT AATTAAAGCC GATAAATTTC TTGAACGATC TTCAGGCGTA GTTGAAACTC TGGACACCCT ACTTAAACAT GGAGATACAA TTAGACTCAT GCACAATAAA ACCAGATGCT TCTTACATTC TCAACCTATT CTGGCACCAA TATCAGACAA TCACTATGAG GTATCTTGCA TATCAGAATT GGAGGTAAAT GACTTCAGAA ATTCATGGAC AGTTGAAGTA CAGGGCCAAG AAAAGTCTGA ATCTCCTTTT TTCCAAAGCG AGAGCGAAGA TGAAGTTCAT CCTATTTCAA CCAATTTTCG ATTAAAGCAC AAGCAATTGG GATGCTATTT GGCTACTACA GGGTATTCAT ATCCTTCGTG GGGATTTCAG CAGGGAGAGG TAGTCTGCAA GTATGCAATA TTATCCAGGG ACAAAACAAC TTGGTGGAAT ATTGAAGACC ATTCCAATAA CAAGTTCGAG ACACCTTCGG AATCATATGT GCCTCCCAAA CCTAAGTTCT GGAAAGAGTT TGTGTTGCTA AACTACGGTA TGCTTGCCTC AAATAATGCC CTTATTCCAG ACCCAGATAA ATTTGATAGA TTGAGTTCCG AATGGTGGGA GTGGCCACTC TTACTTTCTG GAATTAGGCT TGGCTCGTGG GGAGCAGATG ATGTTAAGTA CTTCTTAATG GGTAATCCAT TTATAACTTG GTTCTCAACT TTCTCCTTGT TGATTTTTAT TCTTTATGTC GCAGCATGTG CGGTGATGCA TCAAAGGCAA ATCTTATCAT ATAGTGTTCT TGGAGAGAAC TGGAATGAAC TATTGATTCA AGGAATTTTC CCTTTTCTAG CTTGGTTTTT GCATTATTTC CCCTTTGTCG TTATGGGACG AGTAAAGTAT CTACATCACT ATGTTCCAGC ACTATACTTC GCCATATTAG TAAGTGCATT CGTAATGGAA ACATTCATAA GAAAGAGATT GAATCGTGTT ATTGTATGCA CAATCTATTT GATTGCATAC ATAATGATTA TAGCATCTTT CTGGTACTTA AAAGACTTCT CATTGGGAAT GGAGGGCCCG CCAAGCAAGT TTAAGAAGTT GAAATTTCTT TCATCATGGA TGCTATGA
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Protein sequence | EYRHLSNRKN QESQNEKILE EIISKTESLS ISSHDNHASI SRVFTMYINP LVLTALSAFV RLYRIDASNK VLWDEAHFGK FGSYYLKHEF YFDVHPPLGK LLVGLSGYLS GYDGNFLFDS GIEYGDNCNY VMMRCFNCMF SILCTPIAYK TSESLGFSQL TTWFICLLVI FEMISLTLSK FILLDSMLLF FTMLAFYCLV NVHNARVKNR LLSRQGTKAL ILTGFSIGCV CSVKWVGLFV TSVIGLYIIY DLLIKFYQLI STDQLGLKEY IFHWISRILT LIIYPFVIYL LCFKIHFLVL NHSGPGDGSI STLLQASLEG NKIKQGPRSV AFDSLVTLRS QGLSPNLLHS HDHSYPEGSQ LQQITTYGFK DDNNDFVIKA DKFLERSSGV VETLDTLLKH GDTIRLMHNK TRCFLHSQPI LAPISDNHYE VSCISELEVN DFRNSWTVEV QGQEKSESPF FQSESEDEVH PISTNFRLKH KQLGCYLATT GYSYPSWGFQ QGEVVCKYAI LSRDKTTWWN IEDHSNNKFE TPSESYVPPK PKFWKEFVLL NYGMLASNNA LIPDPDKFDR LSSEWWEWPL LLSGIRLGSW GADDVKYFLM GNPFITWFST FSLLIFILYV AACAVMHQRQ ILSYSVLGEN WNELLIQGIF PFLAWFLHYF PFVVMGRVKY LHHYVPALYF AILVSAFVME TFIRKRLNRV IVCTIYLIAY IMIIASFWYL KDFSLGMEGP PSKFKKLKFL SSWML
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