| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_40120 |
|---|
| Symbol | |
|---|
| ID | 4852004 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009068 |
|---|
| Strand | + |
|---|
| Start bp | 3401331 |
|---|
| End bp | 3402245 |
|---|
| Gene Length | 915 bp |
|---|
| Protein Length | 304 aa |
|---|
| Translation table | |
|---|
| GC content | 44% |
|---|
| IMG OID | 640393712 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001386977 |
|---|
| Protein GI | 126276281 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1073] Hydrolases of the alpha/beta superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.98867 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.767485 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTTGGTA TTCTGTCGGC CATCTTTACC AAACTTCTCG GGGTTCTCAA GACGATGGCC
CAAATAGGCA TCTCGTTAGG GGCTTTAGTT CTCCTAGGAC TCTATACTTA TCAGAACACA
TTGATCTATC CAGCCTCTCT CAACGATGGA CATGGACATT GCGCCACGCC CGATGAGTAC
GACATGCCAG ATTACGATCT TGTTAACTTG CGTACGGAAG ATGGGGAAAC TTTGCAATGC
TACCTGTTGA AACACGATCG TACTTCTCCA GACTATGCCA ACAAAACCAT CTTGATACTA
TCACCCAATG CTGGCAACAT TGGCCATGCC TTGCCAATTG TTTCGATATT CTACCGCAAC
TTCGGATACA ATGTCTTTAT CTACTCTTAC CGTGGATACG GTCGGTCTAC GGGCAAAGCT
TCCGAAAAAG GCTTGAAGAT AGATGCTCAA ACGGTGATGC AATATTTGAC TGAGGAAGAC
GAACAGTACC TGCAATCGTC GTTGGTTCTC TACGGTCGTT CATTGGGTGG TGCTGTAGCT
ATTTATATTG CAGCTACGAT GTCGAAATCC ATTTGTGCTG TCATCTTGGA GAACACCTTT
CTCTCTATTC GTAAAACAGT TCCACATGTA TTTCCTTTGC TCAAGTACTT CACCAGTTTC
GTACACCAGC ATTGGGATCT GGAGTCGCTT GTTCCTCTAA TTCCAGCCAG TATACCTGTG
TTACTTTTGA GTGCTCGTAA AGACGAAATC GTACCTCCAG AGCATATGGA CAGAATCAAT
GCTTTGCTGA AAAGTGAAGA CAAGACCTTC TACACATTTG AAAACTCGGC TCACAATGAC
ACTGTGATCC AGCCCGAATA TTGGAACTAC ATTCAGGTAT TTATCCAGGA CAAAGTTAAC
CCTGTGGGGT ATTAG
|
|---|
| Protein sequence | MFGILSAIFT KLLGVLKTMA QIGISLGALV LLGLYTYQNT LIYPASLNDG HGHCATPDEY
DMPDYDLVNL RTEDGETLQC YLLKHDRTSP DYANKTILIL SPNAGNIGHA LPIVSIFYRN
FGYNVFIYSY RGYGRSTGKA SEKGLKIDAQ TVMQYLTEED EQYLQSSLVL YGRSLGGAVA
IYIAATMSKS ICAVILENTF LSIRKTVPHV FPLLKYFTSF VHQHWDLESL VPLIPASIPV
LLLSARKDEI VPPEHMDRIN ALLKSEDKTF YTFENSAHND TVIQPEYWNY IQVFIQDKVN
PVGY
|
|---|
| |