| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_39828 |
|---|
| Symbol | UCRI |
|---|
| ID | 4851748 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009068 |
|---|
| Strand | - |
|---|
| Start bp | 2732959 |
|---|
| End bp | 2733435 |
|---|
| Gene Length | 477 bp |
|---|
| Protein Length | 158 aa |
|---|
| Translation table | |
|---|
| GC content | 48% |
|---|
| IMG OID | 640393456 |
|---|
| Product | Ubiquinol-cytochrome c reductase iron-sulfur subunit, mitochondrial precursor (Rieske iron-sulfur protein) (RISP) |
|---|
| Protein accession | XP_001387090 |
|---|
| Protein GI | 126275479 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0723] Rieske Fe-S protein |
|---|
| TIGRFAM ID | [TIGR01416] ubiquinol-cytochrome c reductase, iron-sulfur subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.212217 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTTGGTT CCATGGGTTT GTTGTCTGCT GCTGGTGCCA AGTCCACTGT GGAAGCATTC
CTTTCGTCCA TCGCTGCCTC TGCTGATGTT TTGGCTATGG CTAAGGTCGA AGTCAAGTTG
GGAGCTATCC CAGAAGGTAA GAACGTCATC ATCAAATGGC AAGGTAAGCC TGTTTTCATC
AGACACAGAA CTGCTGATGA AATCGACGAA GCCAACCAGG TTGACATCAA AACCTTGAGA
GACCCACAGA ACGACATTGA CCGTGTCAAG AAGCCTGAAT GGTTGGTCAT GTTGGGTATC
TGTACCCATT TGGGATGTGT TCCTATCGGT GAAGCTGGTG ATTTCGGAGG TTGGTTCTGT
CCTTGTCACG GTTCCCATTA CGATATCTCC GGCAGAATCA GAAGAGGTCC AGCTCCATTG
AACTTGGAAA TCCCACAATA CGAGTTCTCC GATGAAGAAA CCTTGTTGGT TGGTTAA
|
|---|
| Protein sequence | MVGSMGLLSA AGAKSTVEAF LSSIAASADV LAMAKVEVKL GAIPEGKNVI IKWQGKPVFI
RHRTADEIDE ANQVDIKTLR DPQNDIDRVK KPEWLVMLGI CTHLGCVPIG EAGDFGGWFC
PCHGSHYDIS GRIRRGPAPL NLEIPQYEFS DEETLLVG
|
|---|
| |