Gene PICST_39406 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_39406 
Symbol 
ID4851943 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009068 
Strand
Start bp3260929 
End bp3261258 
Gene Length330 bp 
Protein Length109 aa 
Translation table 
GC content38% 
IMG OID640393651 
Productpredicted protein 
Protein accessionXP_001386946 
Protein GI126276096 
COG category[T] Signal transduction mechanisms 
COG ID[COG0271] Stress-induced morphogen (activity unknown) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0761319 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTAACC CTTCTACTAT TATAAAATCG TCTGATGCTC CTGGCCCCAT TGAAGAATCT 
ATAGTTGAGA AGTTGGTCAA TAATCTCAAC CCCAGTTATT TAAAAATTGC TAACGATTCG
CTGAAACACG CTCATCATGC TGGAATCAGA GGTGCTACCA ATGTCACTGA ATCGCATTTC
CGTATTGAAG TTATAAGTAA CGAATTCGAA GGAAAGAATA TGCCTACCAG ACATAGATTG
ATCTATCTGT TATTAGACGA TGAATTGAAG AATAAGGGTG TACATGCTTT ACAGATGAAG
ACGAAGACGG AGACAGAGTC TAAGAAGTGA
 
Protein sequence
MSNPSTIIKS SDAPGPIEES IVEKLVNNLN PSYLKIANDS LKHAHHAGIR GATNVTESHF 
RIEVISNEFE GKNMPTRHRL IYLLLDDELK NKGVHALQMK TKTETESKK