| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_39216 |
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| Symbol | GRP2.3 |
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| ID | 4851564 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | + |
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| Start bp | 2152286 |
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| End bp | 2153293 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | |
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| GC content | 44% |
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| IMG OID | 640393272 |
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| Product | GRE2-like protein |
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| Protein accession | XP_001387655 |
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| Protein GI | 126274869 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.239106 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.00871069 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGTCCAAAA CTACAGTTTT CATCACTGGT GCCACCGGCT TTGTAGCCCA AAATACGATT
GTGGAGCTTC TCTCCAGAGG ATACAGTGTT GTCGGTTCAG TTAGATCGGA AGAGAAGGGT
GAAATGTTGA AGACTTACTT TGGTGATAAC TTCCAGTACG TTGTCGTGGC TGGGTTTGAG
AATAAGGGAG CCTTTGATGT AGCCTTAAAG CAACATCCTG AAGTAACCGT CTTTTTGCAT
ACTGCTTCCC CAGTTAGTTT TGGTACTGAA GATTTGGAGA GGGACGTCTT GATTCCTGCT
ATCGAGGGTA CAAGAAATGC ATTGCAATCT GTGCACGAAC ATGCTCCTCA GGTCAAGAGA
GTGGTCGTCA CCAGTTCTGC TGTTACTTTG AGCAACTTCT CTGATGTCTC TGATCCTAAA
TTCAAGGCAA ACGAGGACTT GTGGTACGGT GTTACTTACG AAGAGGGTTC GAAGAACCCC
TCAATTGCTT ATACAGCTTC TAAAGTATTT GCCGAAAAGG CTGCCTGGGA ATTTGTTGAA
ACCAATAAAC CAAACTTCTC TCTTTCAACC ATCCTTCCTC CATATGTCTT TGGCCCTCAG
GCACAGGATG AGTCTGCCAA AGGTCAATTG AACATTTCAG CTGAATTTGT TGCTGCTGTC
TACCGTTTGT CCAAGATTGA TAAAGTTCCT GAAGTATTCG GTCCTTTCGT TGATGTCAGA
GATGTGGCTA AGGCTCATGT TATTGCATTC GAGAACGATG AAGCCAAGGG CAAGAGAATC
ATTACTTACT CAGGAAGATT CCACCTGCAA ACAATCTTGA ACATCATCAG AGACAACTTT
GCCGATCTTC GTGATAAATT GCCCGTTGGT ATTCCTTCCA ATGGTGACGT CTCCGAGTCT
GTTGCATGGG ACGACCAGAA ATCGAAGAAG ATTTTAGGAT TCGAGTTCAT TGATATCGAG
AAGACTGTTA TCGATACTGT CAATCAATTG ATCAGAGCCA ATAAATAA
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| Protein sequence | MSKTTVFITG ATGFVAQNTI VELLSRGYSV VGSVRSEEKG EMLKTYFGDN FQYVVVAGFE
NKGAFDVALK QHPEVTVFLH TASPVSFGTE DLERDVLIPA IEGTRNALQS VHEHAPQVKR
VVVTSSAVTL SNFSDVSDPK FKANEDLWYG VTYEEGSKNP SIAYTASKVF AEKAAWEFVE
TNKPNFSLST ILPPYVFGPQ AQDESAKGQL NISAEFVAAV YRLSKIDKVP EVFGPFVDVR
DVAKAHVIAF ENDEAKGKRI ITYSGRFHLQ TILNIIRDNF ADLRDKLPVG IPSNGDVSES
VAWDDQKSKK ILGFEFIDIE KTVIDTVNQL IRANK
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