Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_37626 |
Symbol | NSR1 |
ID | 4850962 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009068 |
Strand | - |
Start bp | 566863 |
End bp | 567600 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | |
GC content | 50% |
IMG OID | 640392670 |
Product | nuclear localization sequence binding protein |
Protein accession | XP_001387749 |
Protein GI | 126273923 |
COG category | [R] General function prediction only |
COG ID | [COG0724] RNA-binding proteins (RRM domain) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GAGCCAGCTA CTTTGTTCGT TGGTAGATTG TCGTGGAACA TCGACGATGA GTGGTTGAGA AGAGAATTCG AACCTCTTGG TGGTGTTATT TCTGCCAGAG TCATCATGGA AAGAGCAACA GGTAAGTCCA GAGGTTACGG TTACGTTGAC TTCGACAGCA AGTCTGCTGC TGAAAAGGCT CTTAACGAAT ACCAGGGTAG AGAATTGGAC GGTAGACCAA TCAACTTGGA CATGTCGACT GGTAAGCCAC ATGTCACCAA GAGCACTGAA AACAGAGCCA AGCAATACGG TGACACTCCA TCTGCTCCAT CTGACACTCT TTTCATTGGT AACTTGTCCT TCAACGCTGA CAGAGACAAC TTGTTCAACA TCTTCGGTGT ACACGGTACC GTCATCTCCT GTAGAATCCC AACCCACCCA GACACCCAAC AGCCAAAGGG TTTCGGTTAC GTCCAATTCT CGTCTGTTGA CGAAGCCAAG GCCGCTATGG AAGCCTTGAA CGGTGAATAC ATCGAGGGCC GTGCTTGTAG ATTAGACTTC TCCACTCCAA AGGACCCTAG TTCCTCGGGT AACAGAGGTG GTTTCGGAGG CAACAGAGGT GGTTTCGGCG GAAACAGAGG TGGTTTCGAC GGAAACAGAG GTGGCTTCGG CGGTCGTGAA AGATCGTCTA CCCCAACCCC AACCAGATCT GGTCCTAAGA CCGCCGAGTT CAAGGGTACC AAAAAGACCT TTGACTAA
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Protein sequence | EPATLFVGRL SWNIDDEWLR REFEPLGGVI SARVIMERAT GKSRGYGYVD FDSKSAAEKA LNEYQGRELD GRPINLDMST GKPHVTKSTE NRAKQYGDTP SAPSDTLFIG NLSFNADRDN LFNIFGVHGT VISCRIPTHP DTQQPKGFGY VQFSSVDEAK AAMEALNGEY IEGRACRLDF STPKDPSSSG NRGGFGGNRG GFGGNRGGFD GNRGGFGGRE RSSTPTPTRS GPKTAEFKGT KKTFD
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