| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_37460 |
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| Symbol | ZPR1 |
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| ID | 4851051 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | + |
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| Start bp | 818805 |
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| End bp | 820298 |
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| Gene Length | 1494 bp |
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| Protein Length | 497 aa |
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| Translation table | |
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| GC content | 43% |
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| IMG OID | 640392759 |
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| Product | nucleolar zinc-finger protein |
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| Protein accession | XP_001387386 |
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| Protein GI | 126274037 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1779] C4-type Zn-finger protein |
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| TIGRFAM ID | [TIGR00310] ZPR1 zinc finger domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0530225 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.336313 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCTGCCG ACGAGGAACA AAAACCGCAA GATCTCTTCA CTAGCGTGGG AGAACAGGCT
CAAGAAGTAG ATGATCAGGA AACTAATGTT GCCGGAAGCA ACGAAGTCAG ACAGACCGGA
GCGGAGGATG CTGAGGGACA TCCAGTTCAG GAAATCGAGT CGTTATGTAT GAACTGTCAC
AAGAACGGAA TCACAAGAAT GCTTTTGACC AAGATTCCAT ACTTCAGAGA AATCATCTTG
ATGTCATTTG AATGTACTCA CTGCGGATTC AAGAACAGCG AAATCCAGCC AGCTGCACAA
ATAGCCGAAA AGGGATCAAG GTACGTGTTG AAACTTGAAA CTAAAGAAGA TTTCAACCGT
CAAGTCGTGA AGTCTGAGAC TGCCTCTGTA AGATTCTCAG AGTTGGACAT TGAGATTCCA
CCAAAGAGGG GCCAGTTATC AAACATCGAG GGTTTATTGG AAGAAATGAT CGAAGATTTG
GAATCCGACC AACCCGCCAG AGAAACCATG CAACCGGAAA TCTACCAAAA GATCAAAGAA
GTTATCACCA AAATTAGATC GTTTATCAAT GCTGAACCCA ACACCTTACC ATTGACCTTC
ACCATTGATG ATCCAGCAGG TAACTCGTGG ATTGAATACC TTCCAGGAGA GCCCAGTCAT
AAGTGGGCCA TGTACGAATA CTCAAGAACT GCTGAGCAAA ATGTGTTTTT GGGCTTGATA
TCGGCTGACG ATGTGGCCAG ACACCAACAA GAAGAATTGG CCAATAAGAA GAATGCCACT
TCTAAGAACA TCTCTTCTTC TTTGAATAAG AGCTCTGAAA AGGATGACGA ACATAACCCA
AGAGCTACGG GCTTTATCTC TGACGAAACT GAAATTGAAA ATTTTGAAAA CGAAGTGCAA
ACCTTCCAGG CTACTTGTTC TTCTTGTTTC CAGCCATGCT CAACACACAT GAAGACTGTT
AACATTCCTC ACTTCAAGGA TGTCATCTTG ATGTCGACTG TATGTGATCA TTGTGGCTAT
AAGTCTAACG AAGTCAAAAC AGGTGGAGAG ATTCCTCCTC GCGGAAAGAA GATCACCTTG
AAAATCACCG ATCCTGAAGA CTTGGCTAGA GATATATTGA AGAGTGAAAC TTGTGGATTG
TCAATTCCAG AATTGAACTT GGATTTGACT CCAGGAACAT TAGGAGGTAG ATTCACTACT
ATTGAAGGAT TGTTGACTCA AGTTGCAGAA GAGTTGAACT CCAGAGTGTT CAGTCAATCA
TCAGACTCTA TGGATGAAGC TACCAAGTCC AGATGGACAA GTTTCTTCGC TAGATTGCAA
GATGCTATCG ACGGCAAAAT ACCATTCACT ATTATTGTCG AAGACCCATT GGCTTCTTCG
TACATCCAAA ACGTCTACGC TCCAGACAAT GACCCCAACA TGACTATCGA AGAGTTTGAA
AGATCCTTTC AACAAAACGA AGACTTAGGT TTGAATGATA TGAAAACTGA CTAA
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| Protein sequence | MAADEEQKPQ DLFTSVGEQA QEVDDQETNV AGSNEVRQTG AEDAEGHPVQ EIESLCMNCH
KNGITRMLLT KIPYFREIIL MSFECTHCGF KNSEIQPAAQ IAEKGSRYVL KLETKEDFNR
QVVKSETASV RFSELDIEIP PKRGQLSNIE GLLEEMIEDL ESDQPARETM QPEIYQKIKE
VITKIRSFIN AEPNTLPLTF TIDDPAGNSW IEYLPGEPSH KWAMYEYSRT AEQNVFLGLI
SADDVARHQQ EELANKKNAT SKNISSSLNK SSEKDDEHNP RATGFISDET EIENFENEVQ
TFQATCSSCF QPCSTHMKTV NIPHFKDVIL MSTVCDHCGY KSNEVKTGGE IPPRGKKITL
KITDPEDLAR DILKSETCGL SIPELNLDLT PGTLGGRFTT IEGLLTQVAE ELNSRVFSQS
SDSMDEATKS RWTSFFARLQ DAIDGKIPFT IIVEDPLASS YIQNVYAPDN DPNMTIEEFE
RSFQQNEDLG LNDMKTD
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