Gene PICST_34722 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_34722 
SymbolARD1 
ID4851997 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009068 
Strand
Start bp3385297 
End bp3385938 
Gene Length642 bp 
Protein Length213 aa 
Translation table 
GC content45% 
IMG OID640393705 
ProductN-terminal acetyltransferase complex ARD1 subunit (Arrest-defective protein 1) 
Protein accessionXP_001386974 
Protein GI126276259 
COG category[R] General function prediction only 
COG ID[COG0456] Acetyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.371029 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGAATAA CAATCAGACA GGCCACCATC AACGACATCC AGGCGATGCA AAATGCGAAC 
TTGCACAACT TGCCAGAGAA CTACCAGTTG AAGTATTACA TGTACCATAT CTTATCGTGG
CCGCAGGCTA GTTTTGTGGC GACGACGTAC GAAGATATTG TAGAGAGTAA CGACACTGAA
GCTGGCGAAG AGTTTGGTGG AGAAAAGGAG GATCCTAAGG GAGACTCTGC CTACATAAAC
CGAGGAGAAA AGATTGTAGG ATATGTGTTG GGAAAGATGG AAGATGATCC CGAGGCAGAG
GACAAAACCC CACATGGCCA TATCACATCG TTGTCTGTGA TGAGAACTTA CCGTAGAATG
GGTATAGCAG AGAAGTTGAT GCGCCAGTCG TTGTATGCCA TGTGCGAATC TTTTGATGCC
CAGTATGTTT CTTTGCATGT TAGAAAATCC AATCGAGCTG CATTGCATTT GTATAGAGAT
TCACTCAATT TCGAAGTGAC ATCTATCGAA AAGTCGTACT ACCAAGATGG AGAAGACGCT
TATGCCATGA GATTGACGTT GGAGTTAGAT GAGTTGCTTC CTTCGTTGGC CCAGAAGGGG
GAACGGGATG ATTTGTCTAA GGATTTGTTG GAGAGTTTGT AG
 
Protein sequence
MGITIRQATI NDIQAMQNAN LHNLPENYQL KYYMYHILSW PQASFVATTY EDIVESNDTE 
AGEEFGGEKE DPKGDSAYIN RGEKIVGYVL GKMEDDPEAE DKTPHGHITS LSVMRTYRRM
GIAEKLMRQS LYAMCESFDA QYVSLHVRKS NRAALHLYRD SLNFEVTSIE KSYYQDGEDA
YAMRLTLELD ELLPSLAQKG ERDDLSKDLL ESL