| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_34417 |
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| Symbol | CAD3 |
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| ID | 4851457 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | + |
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| Start bp | 1857323 |
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| End bp | 1858309 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | |
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| GC content | 44% |
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| IMG OID | 640393165 |
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| Product | hypothetical protein |
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| Protein accession | XP_001387595 |
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| Protein GI | 126274585 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.584917 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCTGAAA CAATCTTAGT CACAGGTGGT ACCGGTTACG TCAGTAACTG GGTCATTCTC
TACGCCTTGG AAAGAGGTTA CAAGGTTAAG ACCTCATTGA GAAGTCTTTC GAAAGAGGCT
CAATTGCGTG AGTCTTTGGT TTTGTCCAGT GACAAGCTCA CCAAGGAATT GGTCGATAAA
AATTTGGATG TCTTTGTCGC TGATTTGGTT TCTGACGATG GCTGGGCTGA GGCTTTCCCA
GGAGTTGACT ATGTTCTTCA CATTGCTTCT CCATTCCCAG CTGTCCAGCC AAAGAACCCG
GATGATATCA TCATTCCAGC CGTTGAAGGT ACCCTCAAAA TCCTCAGATT CGCAGCTAGC
ACGCCTACCG TAAAGCAAGT TGTAGTCACG TCTTCTATGG CAGCAATTGC TTATGGCCAT
GGTGAGCATC CCGAACCATT TACTGAGAAG GATTGGTCTA ACAAGGACAA TCTTACTTCC
GCTTATCTTC TCTCAAAGAC TTTGGCTGAA GAAGGGGCAT GGAAATATGT CAAGGAAAAT
AATGTCAAGT ATGCCTTGAC TGTTATGAAC CCAGCATATA TCTTTGGTCC TACTTTAAAG
AAAGGTACGG GTTTCCCAGC CTCGTTGGAA TTGATTCAAA AGTTGGTGGA TGGTACCAAT
AAGGACGGTG CTGCCAGTAT GTTCTTGAGT TATGTGGACG TCAGAGATAT TTCCACCTTA
CATCTTGATG CCTTGACCAA TCCTAAGGCT AAGGGTGAAC GTTTTTTGGT AAACACTGGA
GTAAATATCA GTTTGTTGGA AATTGCCGAT ATCTTGAGAG AGGTGTTACC AGCCGAAAAA
GCTAAAAATC TACCTACCAA GGAATTGGAA GGTAAGAAGG ATGACAGAAG ACCATCGGAC
GTTACCAAGG CCAGAACAAC TTTTGGCTGG GCACCAATTT CACCCAAAGA AACTTTCCTT
GCGACCGTCA ACAGTCTTCC ACAATAG
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| Protein sequence | MSETILVTGG TGYVSNWVIL YALERGYKVK TSLRSLSKEA QLRESLVLSS DKLTKELVDK
NLDVFVADLV SDDGWAEAFP GVDYVLHIAS PFPAVQPKNP DDIIIPAVEG TLKILRFAAS
TPTVKQVVVT SSMAAIAYGH GEHPEPFTEK DWSNKDNLTS AYLLSKTLAE EGAWKYVKEN
NVKYALTVMN PAYIFGPTLK KGTGFPASLE LIQKLVDGTN KDGAASMFLS YVDVRDISTL
HLDALTNPKA KGERFLVNTG VNISLLEIAD ILREVLPAEK AKNLPTKELE GKKDDRRPSD
VTKARTTFGW APISPKETFL ATVNSLPQ
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