| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_28819 |
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| Symbol | |
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| ID | 4851568 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | + |
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| Start bp | 2163135 |
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| End bp | 2164652 |
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| Gene Length | 1518 bp |
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| Protein Length | 505 aa |
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| Translation table | |
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| GC content | 43% |
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| IMG OID | 640393276 |
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| Product | predicted protein |
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| Protein accession | XP_001387657 |
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| Protein GI | 126274883 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0738] Fucose permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00143526 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCACCT CATCCTACGA TCGAGTATCG CTAGATCTGC TGCTCCCCAC AGAAGATTCC
ACCTCATCTT CTCCGCCTTT TCCCCAAGTC TCACACTTTA ACAAATCTGA GAAATACACA
ATCGTCTTCG AAGATGAACT TCTTCATATA GATTCCAGCA ACTGGAGAAC ATCTACACTT
CTCAAGGTTC AGATATTCTC TGCCTATTGC GTTTTCATTC TATTTGGTCT CGCTGAGCAA
ACCATCGGAT CCATTATCCC CATACTTCAA AAGGACTATT CCATCAATGA CTTACAAGTC
AGTCTCATAT TTATATCCTC TATCACGGGC TATTTCACCA TGGCCCTCAT CAACGATTAC
ACCCACAAAG CTCTTGGAAT AAAAGGAGTC GTCGTACTAG GCTCCACTTC CATGACGTTG
GGATATTTGA TAATTTCAAC AAGACCACCA TTCTTCATCT TTGCTTTGTG CTATGTCATG
AGCGGAATTG GGTTTGGCTC GCTAGATGCT GGTCTCAACG GCTGGATGGG CAATTTGATT
GATTCAAACC AGCTTTTGGG TATCCTCCAT GGTTGTTATG GTATTGGATG TATGATTTCT
CCACCACTAA TCACGTATTT GTTGGAAAAG CACACTAATC CATGGAAGTG GAACCATTAC
TATATCGTGT TGTCAGTAGT TGGATGCTGC TGTGTAGTTC TGCTAATCTT AACGTTCAAG
AATGAAACAC CTAAGAAGTA CAAATTCATG GGTCAGCTCA AAAACGAAGC GCACAAGAAG
AAGCTGAAAG CACCCATAAA TGATGAAGAG ATAGAGTTGG ATTCGCTTAC CAAAACCCAA
GACGTAGATA TCTCCGACGA AGAACTCACT GCCAGTGATT CGGAGCAAGA AGATAACACT
GCATCGCTTC TTGTGGCACT TAAATCACCG TTGGTATGGG CATTTGCAAC TATTTTGTTT
ATATATGTGG GTGGAGAAGT AGCATTTGGT GCCTGGCTCA TGACCTTCTT GATCAGAATC
AAAAAGTTCC CTTACAAGCT TTCATCCTGG ATGGCTACTT CCTTCTGGAT GGGCCTTACT
GTAGGACGAA TAGCGCTAGG TTTTGTGACA GCCTATTACT TCAAGACAGA GTTAATGGCC
AACTTCGTCT ATATTATTCT TTCAACCTTG GGATACTTCG TGTTCTGGCT CTTTGCAGCA
ACCAACTGGG TTGTCTTGCT ATTTTTGGTA GTTTTTTTGA CTGGCATGGC AGTAGGACCC
ATTTTCCCTA CTACTATCAT AACAGCAATA ACTATCCTAC CTTCCAAATA CCATGCCTCT
GGAATCGGCT TCGTCTGTGC TTTTGGTGGA GGTGGAGCGG CTGGTGTGCC GTTCTTAATT
GGATTAGTAG CCCAATCCAG TGAAGTTGGA TTGCGTATTT TCCCACTTAT TGTGTTCGTA
ATCTTCCTCA TCCTTGTAGC GATGTGGGCT GTTATTGTCA GAAGGTTCAC AAAGACTTAT
GATCGCAACG CAATCTAG
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| Protein sequence | MSTSSYDRVS LDLLLPTEDS TSSSPPFPQV SHFNKSEKYT IVFEDELLHI DSSNWRTSTL
LKVQIFSAYC VFILFGLAEQ TIGSIIPILQ KDYSINDLQV SLIFISSITG YFTMALINDY
THKALGIKGV VVLGSTSMTL GYLIISTRPP FFIFALCYVM SGIGFGSLDA GLNGWMGNLI
DSNQLLGILH GCYGIGCMIS PPLITYLLEK HTNPWKWNHY YIVLSVVGCC CVVLLILTFK
NETPKKYKFM GQLKNEAHKK KLKAPINDEE IELDSLTKTQ DVDISDEELT ASDSEQEDNT
ASLLVALKSP LVWAFATILF IYVGGEVAFG AWLMTFLIRI KKFPYKLSSW MATSFWMGLT
VGRIALGFVT AYYFKTELMA NFVYIILSTL GYFVFWLFAA TNWVVLLFLV VFLTGMAVGP
IFPTTIITAI TILPSKYHAS GIGFVCAFGG GGAAGVPFLI GLVAQSSEVG LRIFPLIVFV
IFLILVAMWA VIVRRFTKTY DRNAI
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