Gene PICST_28199 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_28199 
Symbol 
ID4850977 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009068 
Strand
Start bp607037 
End bp607372 
Gene Length336 bp 
Protein Length111 aa 
Translation table 
GC content46% 
IMG OID640392685 
Productpredicted protein 
Protein accessionXP_001387348 
Protein GI126273938 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00737399 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGCAACTTA ACTTCTCTTC TTTAACTATT TTGGCCCTTG CTGGTTACGC CTTGAGTGCT 
CCTTGTGCAA GTTGTAATGC TAACAAGGTT CCAACCAACA ACCATCACGG TAACAACCAT
AACAACCATG GTAACAATCA TGGCAACAAT CATGGCAACA ACAATCACGG TAACAACCAT
GGTGGTAAGA CTGTTGTTGT TCAGCAAGCT CCTGCTCCCA CACCTGCTCA GCCACAAGCT
GAAGCTGAAG GTATTGGTGC AGGTATTGGT GGTATACTCA ATGGTATCGG AGCTCTTGGT
GTTGGAATTG GTGCTGGTGG AATCGGCCTC AATTGA
 
Protein sequence
MQLNFSSLTI LALAGYALSA PCASCNANKV PTNNHHGNNH NNHGNNHGNN HGNNNHGNNH 
GGKTVVVQQA PAPTPAQPQA EAEGIGAGIG GILNGIGALG VGIGAGGIGL N