Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal_4380 |
Symbol | |
ID | 4844753 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS155 |
Kingdom | Bacteria |
Replicon accession | NC_009052 |
Strand | - |
Start bp | 5124611 |
End bp | 5126236 |
Gene Length | 1626 bp |
Protein Length | 541 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640121658 |
Product | 60 kDa inner membrane insertion protein |
Protein accession | YP_001052710 |
Protein GI | 126176561 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0706] Preprotein translocase subunit YidC |
TIGRFAM ID | [TIGR03592] membrane protein insertase, YidC/Oxa1 family, C-terminal domain [TIGR03593] membrane protein insertase, YidC/Oxa1 family, N-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000000064378 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAATCTC AACGCAATAT ATTGCTCATA GGACTACTGT TTGTCAGCTT TTTGCTGTGG CAACAGTGGC AAGCAGACAA AGCTCCTAAA CCAGTTGCAA CCGAATCGTC CTTAGTGGCG AACGCGGCAA ACTCACACAG TGCCGATGTT CCAGAAGCTG ATACAGGTGT TCCTGCAGCA GTGACAGCAA CCAGCAAACT GATTACCGTG AAAACCGACC AGTTGGATGT TCAAATTAAT CCAATCGGTG GCGACATTGT TTTTGCTGCG TTAGTTTCAC ACAAGATGGA ACAGGATAAA GATCAACCCT TCGTGTTGCT TGAGCAAACG AAAGATTTCA CTTATATAGC CCAGAGCGGT CTTATAGGTC GCGATGGTAT CGACAGTAGC GCCAAAGGCC GTGCCGCATT TAGCACTGCA GCGACTGAAT ATACCTTAGC CGAAGGTCAA GACACTTTAG AAGTGCCGTT AACTTATGTA GCCGACAATG GCGTGACATA CACTAAAGTG TTTGTATTCC ATCGCGGTAA GTTCAACGTC GATGTTGACT ATAAAATCAA CAACACTTCA GCGGCTCCGC TGCAAGTTCA GATGTACGGT CAAATTAAAC AAACGATTAA ACCGTCTGAA AGCAGCATGG TTATGCCTAC CTACCGTGGT GGCGCATTCT CTACGCAAGA TGTGCGTTAT GAGAAATACA AATTTGATGA CATGGCGAAA AGCAACCTGA ACCAAGCGAC GTTGGGCGGT TGGGCTGCCA TGCTACAACA TTACTTTGTT TCAGCTTGGA TCCCACCGGC TACCGACAGC AACACAATTT TCTCTAGTGT CAGTGCGGGC GGTTTAGCCA ATATTGGTTT CCGCGGCGCG GTATATGATA TTGCACCAGG TGCGACTCAA GAAATTAGCT CACAGTTCTA CGTTGGTCCT AAGGATCAAA AAGCACTGTC AGCCATCTCT GATACCTTAA ACCTAGTGGT CGATTACGGC TTCCTATGGT GGTTAGCTGT ACCTATTCAC TGGCTATTGA TGTTCTATCA ATCATTCGTC GGTAACTGGG GTATGGCTAT TATTCTGATC ACCCTAACCG TTCGTGGTTT ACTGTTCCCA CTGACAAAAG CGCAGTACAC CTCAATGGCG AAGATGCGTA ACCTGCAACC TAAACTGACT GACTTGAAAG AACGCTTTGG TGATGACCGT CAAAAGATGG GTCAGGCCAT GATGGAGCTG TATAAGAAAG AAAAAGTTAA CCCTATGGGT GGCTGTTTAC CTATTATTTT ACAGATGCCA ATCTTCATTG CCTTGTACTG GGTATTGTTA GAAAGCTTCG AATTACGTCA CGCACCATTT ATGCTGTGGA TCCACGATTT ATCGGTACAA GATCCTTACT ACATATTGCC GTTGCTGATG GGCGTATCTA TGTTTGTGAT GCAGAAGATG CAACCTATTG CACCGACTAT GGACCCAATG CAAGTGAAAA TGATGCAATG GATGCCAGTG ATCTTTACTG TATTCTTCCT CTGGTTCCCA GCGGGTCTAG TACTGTACTG GTTAGTAGGT AACATAGTTG CTATCACGCA ACAGAAGATT ATTTATGCAG GTCTGGCGAA AAAAGGCTTA AAATAA
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Protein sequence | MESQRNILLI GLLFVSFLLW QQWQADKAPK PVATESSLVA NAANSHSADV PEADTGVPAA VTATSKLITV KTDQLDVQIN PIGGDIVFAA LVSHKMEQDK DQPFVLLEQT KDFTYIAQSG LIGRDGIDSS AKGRAAFSTA ATEYTLAEGQ DTLEVPLTYV ADNGVTYTKV FVFHRGKFNV DVDYKINNTS AAPLQVQMYG QIKQTIKPSE SSMVMPTYRG GAFSTQDVRY EKYKFDDMAK SNLNQATLGG WAAMLQHYFV SAWIPPATDS NTIFSSVSAG GLANIGFRGA VYDIAPGATQ EISSQFYVGP KDQKALSAIS DTLNLVVDYG FLWWLAVPIH WLLMFYQSFV GNWGMAIILI TLTVRGLLFP LTKAQYTSMA KMRNLQPKLT DLKERFGDDR QKMGQAMMEL YKKEKVNPMG GCLPIILQMP IFIALYWVLL ESFELRHAPF MLWIHDLSVQ DPYYILPLLM GVSMFVMQKM QPIAPTMDPM QVKMMQWMPV IFTVFFLWFP AGLVLYWLVG NIVAITQQKI IYAGLAKKGL K
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