Gene Sbal_4365 details

Gene Information

• Locus tag: Sbal_4365
• Symbol: atpC
• ID: 4844738
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella baltica OS155
• Kingdom: Bacteria
• Replicon accession: NC_009052
• Strand: -
• Start bp: 5110448
• End bp: 5110876
• Gene Length: 429 bp
• Protein Length: 142 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 640121643
• Product: F0F1 ATP synthase subunit epsilon
• Protein accession: YP_001052695
• Protein GI: 126176546
• COG category: [C] Energy production and conversion
• COG ID: [COG0355] F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit)
• TIGRFAM ID: [TIGR01216] ATP synthase, F1 epsilon subunit (delta in mitochondria)

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 0.49232
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCAGCCA TGACAGTACA TCTTGATATA GTAAGTGCAG AGAGCAAAAT CTTCTCTGGT 
CGTGTAGTTT CGCTGCAAGT GACTGGTTCA GAAGGTGAGT TGGGCATAAT GCATGGCCAT 
GCTCCTTTGC TGAGTTATAT CAAACCTGGC ATGGCGCGCA TCGTCAAGCA AGACGGCAGT 
GAAGAAGTGT TTTACCTTTC AGGTGGTATT CTGGAAGTAC AACCTTCTAC TGTTTCCGTA 
TTGGCTGATG TGGTTATGCG TGCCAAAGAT ATTGATGAGC AAGCGGCATT AGAAGCTAAG 
CGTCGTGCAG AAGCCCATAT GGCTAATGCA GGTGCTGACT TCAATTATGA CGCGGCTATG 
GTTGAACTAG CTAAGGCTAT GGCTCAATTA CGTGTTGTTG AAACCATCAA GAAAAACATT 
GCCAGATAA 

 

Protein sequence

MAAMTVHLDI VSAESKIFSG RVVSLQVTGS EGELGIMHGH APLLSYIKPG MARIVKQDGS 
EEVFYLSGGI LEVQPSTVSV LADVVMRAKD IDEQAALEAK RRAEAHMANA GADFNYDAAM 
VELAKAMAQL RVVETIKKNI AR