| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal_4107 |
|---|
| Symbol | |
|---|
| ID | 4845820 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS155 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009052 |
|---|
| Strand | - |
|---|
| Start bp | 4815752 |
|---|
| End bp | 4816426 |
|---|
| Gene Length | 675 bp |
|---|
| Protein Length | 224 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640121373 |
|---|
| Product | ribulose-phosphate 3-epimerase |
|---|
| Protein accession | YP_001052441 |
|---|
| Protein GI | 126176292 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0036] Pentose-5-phosphate-3-epimerase |
|---|
| TIGRFAM ID | [TIGR01163] ribulose-phosphate 3-epimerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.887514 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGTCCAT TCTTGATTGC TCCATCGATT TTATCTGCCG ATTTTGCCCG TTTGGGCGAT
GATGTAAAAG CCGTGTTAGA TGCGGGGACC GACGTAGTGC ATTTTGATGT GATGGATAAT
CACTATGTTC CTAACTTAAC GATTGGCCCT ATGGTGTGCC AAGCGCTGCG TAACTACGGT
ATTACCGCCG ATATTGATGT GCATTTGATG GTCAAGCCAG TTGACCGCAT CGTGCCTGAT
TTTGCTAAGG CGGGCGCGTC TATTATTACT TTCCATCCAG AAGCTTCCGA ACATGTCGAT
CGCACACTTC AGTTGATCAA AGAGTGTGGC TGTAAAGCGG GTCTAGTGTT TAACCCTGCT
ACACCACTGC ATTATCTCGA CCATGTGATG GATAAGCTGG ATGTGATTCT ATTGATGTCG
GTGAACCCTG GTTTTGGCGG CCAATCCTTT ATCCCATCGA CCTTAGATAA GCTGCGCCAA
GTGCGTGCAC GTATCGATGC CAGTGGTTTT GATATTCGCT TAGAAGTGGA TGGCGGAGTT
AAGGTCGACA ATATTGCCGA AATCGCCGCC GCCGGTGCTG ACATGTTTGT TGCGGGTTCT
GCCATTTTCG GCAAGCCAGA TTACAAAACC GTTGTTGATG AGATGCGTGC CGAACTTGCT
AAAGTTGGGG CATAG
|
|---|
| Protein sequence | MRPFLIAPSI LSADFARLGD DVKAVLDAGT DVVHFDVMDN HYVPNLTIGP MVCQALRNYG
ITADIDVHLM VKPVDRIVPD FAKAGASIIT FHPEASEHVD RTLQLIKECG CKAGLVFNPA
TPLHYLDHVM DKLDVILLMS VNPGFGGQSF IPSTLDKLRQ VRARIDASGF DIRLEVDGGV
KVDNIAEIAA AGADMFVAGS AIFGKPDYKT VVDEMRAELA KVGA
|
|---|
| |