| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal_4008 |
|---|
| Symbol | |
|---|
| ID | 4845073 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS155 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009052 |
|---|
| Strand | + |
|---|
| Start bp | 4704738 |
|---|
| End bp | 4705346 |
|---|
| Gene Length | 609 bp |
|---|
| Protein Length | 202 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 640121271 |
|---|
| Product | OmpA/MotB domain-containing protein |
|---|
| Protein accession | YP_001052344 |
|---|
| Protein GI | 126176195 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACTC TCACATTTTT TCTCAGTGTC ACTCTTTTAG CTGGTTGTTC AATGCGCGAT
ACAGTTAATA TTGACGAAAT GACCACAACC CAAGCCTATG ATCTATCTGA TAAAGATGGT
GATGGCGTGA TAGAGGCCCG TGAACGTTGC AATGATACCG CGCAAGGGGC TGGCACAGAC
AACTATGGCT GCGGCAAAAT CAAAGCGATA AACGAGCGAA AAGAAATAAA TATTTTATTT
CCTAATGACT CTGCATATAT CGCACCTGAG TATTATCCTC AGATAGAAGA AGTTGCCATT
TTTCTTCGTC AGTATCCAAC GACCAAAGTG ACGATTGAAG GCCATACTAG TCGCACAGGC
ACCGATGAGC GTAATGCGGT ATTATCGCAA GATCGTGCAA ATGCAGTGAC TGCTGTGTTA
GCCGAACGCT TTAGTATTGA TAGAAGTCGA TTAACTGCAA TTGGATATGG CTCTAGTCGC
CCTGTTGTTT TAGAGCAAAC ACCAGATGCT GAGATCCGTA ACCGCCGTGT CGTGGCTGAA
GTGACCGGTG ATGATACGGC CACGGACATG AAATGGACGA TTTACTCGGT CGATGACAAC
ACACAATAA
|
|---|
| Protein sequence | MKTLTFFLSV TLLAGCSMRD TVNIDEMTTT QAYDLSDKDG DGVIEARERC NDTAQGAGTD
NYGCGKIKAI NERKEINILF PNDSAYIAPE YYPQIEEVAI FLRQYPTTKV TIEGHTSRTG
TDERNAVLSQ DRANAVTAVL AERFSIDRSR LTAIGYGSSR PVVLEQTPDA EIRNRRVVAE
VTGDDTATDM KWTIYSVDDN TQ
|
|---|
| |