Gene Sbal_3969 details

Gene Information

• Locus tag: Sbal_3969
• ID: 4845012
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella baltica OS155
• Kingdom: Bacteria
• Replicon accession: NC_009052
• Strand: -
• Start bp: 4660772
• End bp: 4661434
• Gene Length: 663 bp
• Protein Length: 220 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 640121233
• Product: flagellar hook capping protein
• Protein accession: YP_001052306
• Protein GI: 126176157
• COG category: [N] Cell motility
• COG ID: [COG1843] Flagellar hook capping protein

Plasmid Coverage information

• Num covering plasmid clones: 35
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAATTGG CCCGCTCTGG TAACAACTCA GTTCAGAATC CTGCAGGTGC ATTAGCTGCA 
CCAGGGAATG ATGCTGCATC ATTAAAAAAT GAATTCATGA CCTTAATGAT CGCGCAAATC 
AAGAACCAAG ATCCCACCAA ACCGCTTAAC AGTGCTGAGT ATATCTCTCA ATTAGCGCAG 
TTTTCGCAGG TCGAAAGCTT AGAGGGTATG CGGAAGAATC AGTCAAACCA AATGGTCATG 
ATGGAAAATT TGGGCATAGT GCAGTCGGCA TCTTTAATTG GTAAGAATGC CATGGTGCCG 
GCGTCTGAGT TTCAACTCGA TGGTGAAGCT GTTGAAGGCA AAGTGTATTT AGAAAATGCC 
GCTGAAGGCT TAGATCTTGA AATTATCGAT GCGCAAGGTC AAGTCGTTAG CACCATTCAA 
CTCGGTGCTC AGGATGTTGG TGACGTTCGC TTCTCTATCG ATCCTGCTGA GTTGGGATTG 
TCTGCTGGCC AATATGAAAT CAAAGCTAAG GCGACACTAG GTGAAAATAG TTTAGTCGCG 
CCAACGTATA TTAAGGCACC GATTGAGAGA GTCCATTTCT CTAGTGCATC CGGCATGATG 
ATGGCTGAAA TGGGCCATGG TGTCGGTGTC GTTTCTGTGC TCAATATTTC TGAAGTTTCG 
TAA 

 

Protein sequence

MELARSGNNS VQNPAGALAA PGNDAASLKN EFMTLMIAQI KNQDPTKPLN SAEYISQLAQ 
FSQVESLEGM RKNQSNQMVM MENLGIVQSA SLIGKNAMVP ASEFQLDGEA VEGKVYLENA 
AEGLDLEIID AQGQVVSTIQ LGAQDVGDVR FSIDPAELGL SAGQYEIKAK ATLGENSLVA 
PTYIKAPIER VHFSSASGMM MAEMGHGVGV VSVLNISEVS