Gene Sbal_3921 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal_3921 
Symbol 
ID4844142 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS155 
KingdomBacteria 
Replicon accessionNC_009052 
Strand
Start bp4616576 
End bp4617490 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content46% 
IMG OID640121187 
Productprepilin peptidase 
Protein accessionYP_001052260 
Protein GI126176111 
COG category[N] Cell motility
[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1989] Type II secretory pathway, prepilin signal peptidase PulO and related peptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.985112 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAGAAT TCATCTCCCT TTTGGGCCAG CACCCTTATC TCTTTATTGC TCTAAGCTTT 
ATTTTTGCCG CTACCATTGG TAGTTTTTTA AACGTGGTAA TCCACAGATT TCCTGTGATG
ATGAAACGTG AGTGGCAGCA AGAATGTAAT CAGTATTTGC AGGAATACCA CGAAGATATA
GTCAACAAGA TAGGTATAAA CCAACTCAAT AAACCTATTG ATGCCTTCCC AGAGAAGTAT
AATCTGGTTG TGCCGGGCTC AGCCTGCCCT AAATGTAAAA CGTCGATTAA GCCTTGGCAT
AATTTCCCCC TATTAGGCTG GCTAATGCTC AAGGGAAAAT GCGCCGCCTG TCAAGCAGCG
ATTTCAGCCC GCTACCCTAT TATTGAATTC ATCACAGGGC TACTTATCGC GACTTTAGCT
TGGCATTTTG GTCCAAGCTG GCAGTTTGTT TTTGCGAGCA TACTCACCTT TGTGCTTGTA
GCACTGACAG CTATCGATCT TGATGAGATG CTGCTCCCCG ACCAGATGAC GTTGCCGTTA
CTTTGGCTAG GCTTGATAAT CAACCTAAAT CATACCTTTG CGAGTCCAAC CGACGCCATT
ATGGGTGCGG CAGCAGGCTA TTTAAGCTTG TGGTCTATTT TTTGGCTATT TAAGATCCTC
ACCGGCAAGG AAGGCATGGG TTATGGTGAC TTTAAACTGC TAGCCGTGTT CGGTGCTTGG
CTTGGCTGGC AAATGCTGCC GCTGGTGATT TTACTTTCGT CCCTCGTTGG CGCAGTCGTT
GGCATCACTA TGATTGTTAG TAAACGCCTG AAACAAGGGA ATCCAATCCC ATTTGGCCCC
TATATTGCCG CAGCTGGCTG GATAGCCTTG CTATTTGGGC AACAGATTGT CGATTGGTAC
CTATCGACAC TGTAA
 
Protein sequence
MSEFISLLGQ HPYLFIALSF IFAATIGSFL NVVIHRFPVM MKREWQQECN QYLQEYHEDI 
VNKIGINQLN KPIDAFPEKY NLVVPGSACP KCKTSIKPWH NFPLLGWLML KGKCAACQAA
ISARYPIIEF ITGLLIATLA WHFGPSWQFV FASILTFVLV ALTAIDLDEM LLPDQMTLPL
LWLGLIINLN HTFASPTDAI MGAAAGYLSL WSIFWLFKIL TGKEGMGYGD FKLLAVFGAW
LGWQMLPLVI LLSSLVGAVV GITMIVSKRL KQGNPIPFGP YIAAAGWIAL LFGQQIVDWY
LSTL