| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal_3711 |
|---|
| Symbol | |
|---|
| ID | 4843351 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS155 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009052 |
|---|
| Strand | - |
|---|
| Start bp | 4337123 |
|---|
| End bp | 4338157 |
|---|
| Gene Length | 1035 bp |
|---|
| Protein Length | 344 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 640120978 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_001052054 |
|---|
| Protein GI | 126175905 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.770554 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGGGATTAT CAGTCCCACA TAATGAGATT GAACTTAAGG TCAAAATGAA GACAGAGGAC
TTAGCGTTAT TCCACCGAAT TGCTGAAACC GGTAGTTTGA TTGAAGCGGC TGATTTGCTT
AACTTGCCAA AATCGACTGT CAGTCGGCGT TTGCAAGCCT TGGAAGATGA GCTGAATATT
AAATTGTTCC ACCGCCAGAG CCGCTCCATG ACGCTCACGT CTGCGGGCAG TCATTTCTAC
CAGCGCTCGC AAAACATTCT GGCCCAGCTC GATGAAACCC TATTCGAAAT GACCAATGAT
GATGCTGAGA TCAGCGGGCA TTTGCGCATT CAAATGTTCC CGATCCACAG CATGAAAATC
TTGATGCAAG CCATTTTCCG CTTTATGGAT ATGCACCCTA AACTCACCTT AGAAGTTATC
AGCAGTTCAG AATCCGTTGA TATGGTGAAA CATAATCTCG ATGTGGCCTT TGTGGTTGAG
CCTGCGTTGG ATACCTTAGA TTTAGTGGTG CGGCCAATTT TTACCACTGA CTTACGTTTT
TACGCGAGTC CTCAATATTT AGCGGTACAC GGCATACCTA AAACACCGAA AGAGATTGAA
GCGCATAATG TGTCTATGTT CCGTTTATCC AACGGCAAAA TTTTTAATGA GTTATTTATC
GGTTCAGAAC AAGAGGTGAG AGTCAGAGGC AATTTCTGCT CTAACAGTAT TGAAGTGGCG
GTTGAGTTTG GATTGCAAGG ACGCGGTATC GTGTATGCGC CTGCTGAGGT CGTGGATGAA
TATGTGCAAA CCGGTGAGTT GGTGACTCTG TTACCTGAAA TCCAGCCCCA CCAAGGCGAA
TGTTTCTTAG CTTATCCATC AAGACGTTAC GTGAGTTTAG CCTGTCGACG CTTTATCGAC
TACATAATGC AAGAGTTAGT GCCAAATGGC GTGCCGATCA ACATGAGCGA GCAAGGCCCA
CGTCGATCCT GCAAAGCCTC TACGGGAGAT TTTTCAGACG ACGTGTTGCG CTTTCCCGTT
AAAAAATCAA GCTAG
|
|---|
| Protein sequence | MGLSVPHNEI ELKVKMKTED LALFHRIAET GSLIEAADLL NLPKSTVSRR LQALEDELNI
KLFHRQSRSM TLTSAGSHFY QRSQNILAQL DETLFEMTND DAEISGHLRI QMFPIHSMKI
LMQAIFRFMD MHPKLTLEVI SSSESVDMVK HNLDVAFVVE PALDTLDLVV RPIFTTDLRF
YASPQYLAVH GIPKTPKEIE AHNVSMFRLS NGKIFNELFI GSEQEVRVRG NFCSNSIEVA
VEFGLQGRGI VYAPAEVVDE YVQTGELVTL LPEIQPHQGE CFLAYPSRRY VSLACRRFID
YIMQELVPNG VPINMSEQGP RRSCKASTGD FSDDVLRFPV KKSS
|
|---|
| |