Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal_3710 |
Symbol | |
ID | 4843350 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS155 |
Kingdom | Bacteria |
Replicon accession | NC_009052 |
Strand | + |
Start bp | 4335754 |
End bp | 4337121 |
Gene Length | 1368 bp |
Protein Length | 455 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640120977 |
Product | MATE efflux family protein |
Protein accession | YP_001052053 |
Protein GI | 126175904 |
COG category | [V] Defense mechanisms |
COG ID | [COG0534] Na+-driven multidrug efflux pump |
TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.232724 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGACA GACACGGGCT GCTCACCGCG CCAATTGGTC GTGTACTGCT CAACATGAGC CTCCCCAACT TAATTGGCAT TATGACCATT CTAGGTTTCA GCCTCGCTGA CACTTTTTTT ATCAGCCAAT TGGGCACCGA AGCCTTAGCC GCCATCAGTT TTACCTTTCC GGTGACCTTA GTGATATCGA GCATCGCCAT TGGTATTGGT GCTGGAGTCT CGACCAATTT AGGTCGGCTT ATCGGCTCGG GTAATGCCCA CAAGGCCAAA GTATTCTTGC ATGATGCCTT ATTGCTGACC TTTGGTTTGA TTGCCAGTTT AGCCGCTCTG GGTAGCATTT TTATCGAGCC ACTGTTTCGC TTACTCGGAG CAAACGATGA CAGCTTGCCG CTAATCCACG ACTATATGAT TTACTGGTAT GTCGGTGCGC CGCTGCTGGT GTTGTTGATG GTGGGCAATC AGGGTTTACG TTCCACTGGC GATACCCGCT CGCCGGCGAT GATTATGGCG CTGGCGGCAA TCATCAACCT CATTCTGGAT CCATTACTTA TCTTCGGTAT TGGGCCGTTT CCACGTTTAG AAATTCAAGG TGCCGCGATT GCAACCCTGT TCGCTTGGTT GGTGGCGTTA TCTTTGTCGG GATATTTGTT GATTGTCAGG CGCAAGATGC TCGAATGGAC AGTATTTGAC ATCGACAGAA TGCGCGCCAA CTGGGCCAAA CTTGCCCATA TCGCCCAACC CGCCGCCTTG ATGAATTTAA TCAATCCGTT AGCCAATGCC ATTATCATGG CCATGTTGGC GCATATCGAC CACAGCGCAG TGGCAGCCTT TGGTGCTGGT ACTCGCTTAG AGTCAGTGTT ATTAATCGTG GTGATGGCGC TATCGTCGAG CTTAATGCCC TTTATCGCGC AGAACTTAGG TGCAGGCCAG CCACAGAGGG CGAAAGAAGC CCTGCTGCTA TCGATAAAAT TTATCTTTAT CTTCCAAACC ATACTTTATA TTCCACTGAT CTTTTTGGCT GAACCTATCG CGCACTTATT CAGTACTGAT CCGCTGGTGA TCGAGTGGTT GAGTTTTTAC ATCTTAGTGT TGCCCTGCGC CTACGGACCT TTAGGCATAG TGATTATTGT CGCGACGTCG CTCAATGCTT ACCACAGACC TATGAGTTCA CTGGTGATCA ACCTGTGCCG CTTAGTACTG CTCATGCTGC CGCTAGCAGC CTTGGGATCG TATATAGGTG ACGTTAAAGG CCTACTGCTC GCGCTACCTG TGACCAATAT TTTGATGGGG ATTGCCTGTT ACTGGCTGGC GCAGCGGATC TGTGAACCGA CAAAGGTCAC AACCGCCAAC GCCATTCGCG AGGGATAA
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Protein sequence | MKDRHGLLTA PIGRVLLNMS LPNLIGIMTI LGFSLADTFF ISQLGTEALA AISFTFPVTL VISSIAIGIG AGVSTNLGRL IGSGNAHKAK VFLHDALLLT FGLIASLAAL GSIFIEPLFR LLGANDDSLP LIHDYMIYWY VGAPLLVLLM VGNQGLRSTG DTRSPAMIMA LAAIINLILD PLLIFGIGPF PRLEIQGAAI ATLFAWLVAL SLSGYLLIVR RKMLEWTVFD IDRMRANWAK LAHIAQPAAL MNLINPLANA IIMAMLAHID HSAVAAFGAG TRLESVLLIV VMALSSSLMP FIAQNLGAGQ PQRAKEALLL SIKFIFIFQT ILYIPLIFLA EPIAHLFSTD PLVIEWLSFY ILVLPCAYGP LGIVIIVATS LNAYHRPMSS LVINLCRLVL LMLPLAALGS YIGDVKGLLL ALPVTNILMG IACYWLAQRI CEPTKVTTAN AIREG
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