| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal_3646 |
|---|
| Symbol | |
|---|
| ID | 4844052 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS155 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009052 |
|---|
| Strand | - |
|---|
| Start bp | 4268140 |
|---|
| End bp | 4268880 |
|---|
| Gene Length | 741 bp |
|---|
| Protein Length | 246 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 640120914 |
|---|
| Product | 23S rRNA (guanosine-2'-O-)-methyltransferase |
|---|
| Protein accession | YP_001051990 |
|---|
| Protein GI | 126175841 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0566] rRNA methylases |
|---|
| TIGRFAM ID | [TIGR00186] rRNA methylase, putative, group 3 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0005449 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAC AAGATATTAT TTTTGGGATC CACGCAGTTG AAGCCCTGTT AAAACACAGC
CCTGAGCGCA TTATCGAGTT ATGGCTGTTA CAAGGCCGTG ACGATGAACG CTTAACTGTG
CTGGCCAATC AGGCCAAAGC CTTTGGCACT ACGATTCAAG TCGCTTCTCG CAAAGCCTTG
GATGACAAAG CGGAAAGCAG CCAACATCAA GGTATAGTCG CACGCGTTAA AGCGGCGAAA
GTGTTGAACG AGCGAGATTT AGATGTGCTG CTTGCTAACA CTGAGCAACC ATTTCTGCTG
ATTTTGGATG GCGTGACGGA TCCCCATAAC TTAGGCGCTT GCCTACGTAA TGCTGATGCG
GCAGGCGTGC AAGGTATTAT CGTGCCTAAA GATAACTCAG TCGGCTTAAC TGCGACTGTG
AGTAAAGTGG CATGTGGCGC GGCGGAAACT GTGCCTTTAT TCCAAGTGAC TAATCTTGCG
CGCACTATGC GTCACCTGCA GGATAAAGGT GTATGGATTG TGGGTACGGC GGGCGAGGCA
GATTGCGAGC TTTATCAAGC CGATCTTAAA GGGCCACTGG CGATTGCCAT GGGTGCGGAA
GATAAAGGTT TACGCCGTTT AAGCCGTGAG TCTTGCGATT CACTGATCTC TATCCCTATG
GCCGGTAGTG TGTCTAGCTT GAACGTATCG GTTGCGACCG GTATTTGCTT ATTTGAAGCT
GTGCGTCAGC GCCGCAGCTA A
|
|---|
| Protein sequence | MKKQDIIFGI HAVEALLKHS PERIIELWLL QGRDDERLTV LANQAKAFGT TIQVASRKAL
DDKAESSQHQ GIVARVKAAK VLNERDLDVL LANTEQPFLL ILDGVTDPHN LGACLRNADA
AGVQGIIVPK DNSVGLTATV SKVACGAAET VPLFQVTNLA RTMRHLQDKG VWIVGTAGEA
DCELYQADLK GPLAIAMGAE DKGLRRLSRE SCDSLISIPM AGSVSSLNVS VATGICLFEA
VRQRRS
|
|---|
| |