| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal_3523 |
|---|
| Symbol | |
|---|
| ID | 4844813 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS155 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009052 |
|---|
| Strand | + |
|---|
| Start bp | 4142676 |
|---|
| End bp | 4143830 |
|---|
| Gene Length | 1155 bp |
|---|
| Protein Length | 384 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 640120792 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001051869 |
|---|
| Protein GI | 126175720 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG2039] Pyrrolidone-carboxylate peptidase (N-terminal pyroglutamyl peptidase) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0015438 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTGAAGC CAGTGTTAAC GCTAATCCTC GCCAGCAGCT TGATCAATAC GGCCAGTGCT
GTGCAGCTAT TTGGTGATGT TGAAGTTTCC CGCCTACCGA CAGCCGAAAC AACCATGGGC
GAAGTCGTGA CTCTTTATCA AGCACTCAAT GATGGCCTGA CCCAGCAGTT AAGTTCCAAG
AAAAACGAAG TCGATGCCAC CCAATTAGCC GCGCGCCAAG GTCACAGATT ATGGCAACAG
GCGGTACGGG ATGTGCAGTC AGGTCATATT GACGACCGAC CTTTATATTG GGCGCGCCTT
GCCATGCTTA ATAGTCTTAA GAGCACCAGC GCCAACTTTA AAATGGCCGA TTGGCAAAAT
GACATATTAA TGAGTGCGGT TGAAAAGGCC TCACGGGGAT TTAGCGATAT TCAATATGGT
GATGATGTCC AAATCAAAAT ATTCCTCACG GGTTTCGATC CCTTCTTCCT CGATAAAGAT
ATCACCCAGA GTAACCCTTC CGGCTTAGTC GCCCTCGCCT TGGATGGTTT CCGTTTTGAG
GTTGATGGTA AAACGGCGCA AATCGAAACC GCTATGGTGC CAGTGCGTTT TGAAGATTTT
AACCAAGGAC TTATCGAATC GCTACTGAGC CCGATATACC GCGATCCTAA AACCAAATTT
GTATTTACCG TCAGCATGGG CCGAACTGAC TTTGATATTG AACGCTTCCC TGCCCGAAAT
CGCAGTGCCG CGGCGCCCGA TAACCAAAAC GTCCTCACTG GCGGCACTAA AACCGCACCG
GTTGCCCCTA AGCTCAATGG CAAAGATTTT ATCGGCCCGC AATTTGTCGA ATTCTCGCTG
CCTGTTGCCG CCATGCAAGT AAAAGATGGC CAATGGAAAG TCAACGATAA CCACACTGTC
ACTACCCTTG CTCGCGGTGA GTTTAGTGCA ACATCATTGA ATGAGCTGCA AAACGAAACG
TCGGTCGAAG GCTCTGGCGG CGGTTATCTT TCTAATGAAA TTTCCTATCG CGCCATAGTG
TTGCAGCAAA AGTTTAATAG CCATGCGAAA GTCGGCCACA TTCATACCCC AAGAGTCAAA
GGCTATGACG CCGATACTGA GCAAGCCATA GTCGAACAAG TACGCACTAT GGTGATGCAA
GCGGCGAGTT TATAA
|
|---|
| Protein sequence | MLKPVLTLIL ASSLINTASA VQLFGDVEVS RLPTAETTMG EVVTLYQALN DGLTQQLSSK
KNEVDATQLA ARQGHRLWQQ AVRDVQSGHI DDRPLYWARL AMLNSLKSTS ANFKMADWQN
DILMSAVEKA SRGFSDIQYG DDVQIKIFLT GFDPFFLDKD ITQSNPSGLV ALALDGFRFE
VDGKTAQIET AMVPVRFEDF NQGLIESLLS PIYRDPKTKF VFTVSMGRTD FDIERFPARN
RSAAAPDNQN VLTGGTKTAP VAPKLNGKDF IGPQFVEFSL PVAAMQVKDG QWKVNDNHTV
TTLARGEFSA TSLNELQNET SVEGSGGGYL SNEISYRAIV LQQKFNSHAK VGHIHTPRVK
GYDADTEQAI VEQVRTMVMQ AASL
|
|---|
| |