Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal_3516 |
Symbol | |
ID | 4845764 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS155 |
Kingdom | Bacteria |
Replicon accession | NC_009052 |
Strand | - |
Start bp | 4125131 |
End bp | 4125613 |
Gene Length | 483 bp |
Protein Length | 160 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640120781 |
Product | diguanylate cyclase |
Protein accession | YP_001051862 |
Protein GI | 126175713 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2199] FOG: GGDEF domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.013928 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGACGCGCT ATAATCCCCT GACCAAGTTG TATAACCGAC ATTACTTTAA TCGCCTTTTT ATTAATAATG AGCAGCATGA TCAATCTGCT GAAGCAGGCA TGTGCTTGGT GATGATTGAT ATCGATTACT TTAAAGATAT TAATGACACG CTAGGGCATA ACGTCGGGGA TCGGATCCTT GAGCAAGTGT CGCAGGTGCT ACAGCACTGT GTGCGTGAAT CTGATGTGGT TGCACGTTGG GGCGGCGAAG AGTTTGTGAT CCTCTGTCAG CAGTCATCTT TACCCTTAGT TGAAAGCTTG TGTGTGCGGA TAGCTGAGAG GATCAAACGT TATCAATTTA CTGACAATGT GCAGTTAACT TGCAGTTTTG GCGTCGCTAA GCTTGCCGAT AACGAACCTA TGATGTTGTG CTTTGAACGT GCTGATCGCG CGCTTTATCG CGCTAAAGCA CAAGGGCGTA ATCAAATGTG CACCGACAAG TAA
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Protein sequence | MTRYNPLTKL YNRHYFNRLF INNEQHDQSA EAGMCLVMID IDYFKDINDT LGHNVGDRIL EQVSQVLQHC VRESDVVARW GGEEFVILCQ QSSLPLVESL CVRIAERIKR YQFTDNVQLT CSFGVAKLAD NEPMMLCFER ADRALYRAKA QGRNQMCTDK
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