Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal_3514 |
Symbol | |
ID | 4845762 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS155 |
Kingdom | Bacteria |
Replicon accession | NC_009052 |
Strand | + |
Start bp | 4121512 |
End bp | 4122399 |
Gene Length | 888 bp |
Protein Length | 295 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640120779 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001051860 |
Protein GI | 126175711 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0347689 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACATCC CAATCAAGAC CTTACAGTGT TTTCTGACCC TAGTGGAAAC TGAAAACTTT ACCCGCGCCG CGCAGAAATG TTTTATCACC CAGCCGACAC TGAGCAAAAT CATCCAAAGA CTCGAGGAGA GCCTAGGGGA AACCTTGCTG ATCCGAAATA ACCAAAAAGT TGAGCTCACT CAGGCGGGGC AGCTATTTGA GCACAGTGCA CGGGAAATCC TCGGCCAATG GCATAGATTA CAGGAGGACA TGAGTAACCT CAGCGGTCTC AAATCGGGGC GGTTGCGATT GGGGGTGTGC CCTATGATGA GCAGCCTTAT CATAGGTTTG CTCACTAGCT ACCGTAAACG TTATCCGGGG GTTGAACTAC ACATGTATGA ATACGGCGGA TTCGGCTGTG AGCAAGCCCT GCTCAATAAC AGTCTCGATA TCGCATTTAC CGCGCTACCC ACAACCCATG AGACTGAACT CGTCAACCAA CCCCTGACTA AGTACCCTTT ACTTGCATGC CTGCCTGAGG GGCATCCCTT AGCCGAAAAA GACCACTTGA ACTGGCAGGA CTTCCAACCC TATCCTTTTA TCCTCTATAA CGAAGACTTC TCCCTCGCTA AGTTGATCAA TCGGCTCAGC CGTAAAGCAG GTGTTCAGCT CAACATTGCC TTTCGCAGCG GCCAGTGGGA TTTTCTCGCC GCCATGGTCG AAGCCGATAT GGGCGTCGCC ATTTTACCTG AGCCGATTTG CAATAGATTA AGCACCAGCA AACTGGTCTT TAAACCTATG CAACCCGCAA TGACATGGGA TCTGACGCTC ATTTGGCGTC AAAGTTTACC TTTAACACCC GCGGCCAAGG CCTTGCTCGA ATTGAGTAAA CAAAAGACTG AACGCTGA
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Protein sequence | MNIPIKTLQC FLTLVETENF TRAAQKCFIT QPTLSKIIQR LEESLGETLL IRNNQKVELT QAGQLFEHSA REILGQWHRL QEDMSNLSGL KSGRLRLGVC PMMSSLIIGL LTSYRKRYPG VELHMYEYGG FGCEQALLNN SLDIAFTALP TTHETELVNQ PLTKYPLLAC LPEGHPLAEK DHLNWQDFQP YPFILYNEDF SLAKLINRLS RKAGVQLNIA FRSGQWDFLA AMVEADMGVA ILPEPICNRL STSKLVFKPM QPAMTWDLTL IWRQSLPLTP AAKALLELSK QKTER
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