Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal_3508 |
Symbol | |
ID | 4845756 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS155 |
Kingdom | Bacteria |
Replicon accession | NC_009052 |
Strand | + |
Start bp | 4113683 |
End bp | 4116322 |
Gene Length | 2640 bp |
Protein Length | 879 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640120773 |
Product | hypothetical protein |
Protein accession | YP_001051854 |
Protein GI | 126175705 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG3127] Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAACAATA AACCGCTCAC TAAGGCGACT CCCACAGAAC TTAAGCAGAT AGAACTTAAG CAAACTTGGC TGAGGCTGAC GTGGCTCAGC CTAAAGGTGT TTATCGCCCA TTATCGTCAT GCGCCCTTGC AGGCGTGCGC GATTCTACTC GGTATCGCCT TGGCCGTGAC TCTGCTGATT GGGGTTAAAG CGACCAACGA CAATGCGGTG CGCAGTTATA GCGATGCGAC TGAGCTTTTG AGCCAGCGTG CCGATGTACT ACTTACTCCG CCCCTTGGAC AAAACACCTT AGATGAATCT GTTTATTTCG CCTTAAGACG AGCCGGATTA AGTCAGGGTC TCGCCGTGGT GAATGGCAAA ATTTCCGGTA AGAATGGTCA GTTTTGGCAA CTGGAAGGCA GCGATTTGAT TGCCGCATTA ACGCTACAAA AATCGAGAAG TCACGCCTCG ACTGAAACGC AGTCAACGAC CTCGCCGCAG ATGAATGAGT TACCGCTTGC CGATCTCCTC AACGGCGCCC CCACAGTAAT AATGAGCCGC AGTCTAGCCG CCAAAGTAGC GCCAGAGGGT AAACTTGTTT TAGAAAATAA CACCTTAGAT GTCATTGCAA TTGATGATAA TTTTGGCCTC GGCAGCGCCA TCTTGGCCGA TATTTCCCTC GCCCAGCAAT TACTGAACAT GCAAGGCCGA TTAAGCTATA TCGCCATGTT CAGCGAGCGA GAAAACTTAC CTCAACTAAA ATCCCAACTC GACGCTTTAG GAATTACGCC GCAAAATGCC AGTTTTAGCC AGCAAGATCA AGGCCAAGCA CTGATAGCGC TGACCCGCAG TTTTCATCTT AATCTCAATG CCATGAGCAT GTTAGCCTTC GTTGTCGGCC TCTTTATCGC CTACAACGGT GTGCGCTACA GCCTAATGAA ACGGCAAGAA CTGTTAGTGC AGTTATTACA ACAGGGAATC GAGCGCCGCG CCTTGATGAC GGCGCTGATG TTAGAATTAA TTTTGTTGGT TGTCATAGGC TCAAGTTTGG GCTTTATCAG TGGCTTGCAA CTCAGCCACT GGCTGCAACC TATGGTCGCC ATGACCTTAG AGCAAATGTA TGGCGCCCAC TTACTCCCCG GTATTTGGCA ATGGACTTGG CTTATCGAGG CAATTGCCCT CACCTTAGGC GCTGCGTTCG CCGCTTGCTT GCCCTTGTAT TTAGATCTTA CGCGCCAAGC ATTGGCACAA GGGGCGAATC GTTATCAGCA AATGCAGGCA CACCGCAAAA CTCATAGCAT TCAATTTGCC TTAGCCTGTG GTTTACTGAC CGTAGCGGCG CTGCTGTTTC CCTTCAGTCA AAGCTATAAC ATCAGCTTAG TGTTGCTCGG TATCGTCGCT ATCGCGATCC CCTTGTTGTT GCCGCAATTA TTACATTGGG GCGTCAGTGC GTTAATGCCC TTGGCACGCC CTGGATTATG GCAATATCTG CTCGCCGAAA CCCGCGAGCT TATCGCACCG CTCTCCTTGG CTATGATGGC AATCTTGCTG GCGCTCAGTG CCAATGTGTC GATGAACACG CTCGTTGGAA GCTTCGAGCA AACCCTGCGG ACTTGGCTAG AAACCCGCTT GCATGCCGAT CTCTACATCC GTCCACCGAG CCAGCGCATC GACACGATTC AAACCCAACT GATGCACGAT CCAGGAGTCA GCGGTCTTTA TCAGCAATGG CAAATTGAAG CCCAGCTTTC ACTCCCTGTA TCGACGGATA ATTCGAGCGC ACAAACAATT CCAATAAGCC TACTTAGCCG TGATGAATAT TCGATTCGCC ACACCAGCGC CCTGAAAGAA AGCCTACCGA CTCTGTGGCA ATCCTACTTT AATGCCCCCG TGATCTTAGT GAGCGAGCCC CTCGCCATTA AATATCAATT GCAGCTTGGC GATAGCGTGT CATTGGATGC GCTTAAGAAA ACCGGTAACA GCCAAGCCAT TATCGGCGGC ATTTATTATG ACCACGGCAA TACCCGCAAC GAGGTAATTA TCAGCCAGCC ATTATGGCAA AAGGCACAAT TACCTGTGCT GCCGATCAGC TTGGCGGCGA ATTTTTACGG TAAAGAGCGA GGCAGCAAGA TCAGTGAAAC GGATCTCGAT GAACTGCAAA TCCAACTGGC TGCCGAGTTA GGCTTATCGC AAGCGCAAAT CTACAGTCAA ACTAAGATTA AAACCCAAGC TATCGCCATG TTTAAGCGGA CTTTTTCGAT TACCTTAGTG CTGAATAGTT TGACGCTAAT TGTCGCCGCT ATTGGTCTTT TTAGTGCCTG TTTAATGTTA ACTCAGGCAC GGCAAGCGCC ACTGGCACGG CTGTATTCAT TAGGCGTGAG TCGTAATGCG CTGCGCGGTA TGGTGTTTAT GCAGATGCTG ATTGTGGTGC TGATCACTTG CCTGCTCGCT ATGCCAACGG GTGCACTGCT AGGTTACCTG CTTATCAACA AGATCACCTT GCAAGCCTTT GGCTGGACGA TAAAAATGAT TTGGGATTGG CAAGCCTATG GCAAAGCAAT ACTGATTGCC TTAACCACCT GCACCTTAGC CGTGCTCTTG CCGCTGTATT GGCAAACCCG CAAGCCATTG GTCGCCAGTC TGCAGCAGGA GACCCTGTGA
|
Protein sequence | MNNKPLTKAT PTELKQIELK QTWLRLTWLS LKVFIAHYRH APLQACAILL GIALAVTLLI GVKATNDNAV RSYSDATELL SQRADVLLTP PLGQNTLDES VYFALRRAGL SQGLAVVNGK ISGKNGQFWQ LEGSDLIAAL TLQKSRSHAS TETQSTTSPQ MNELPLADLL NGAPTVIMSR SLAAKVAPEG KLVLENNTLD VIAIDDNFGL GSAILADISL AQQLLNMQGR LSYIAMFSER ENLPQLKSQL DALGITPQNA SFSQQDQGQA LIALTRSFHL NLNAMSMLAF VVGLFIAYNG VRYSLMKRQE LLVQLLQQGI ERRALMTALM LELILLVVIG SSLGFISGLQ LSHWLQPMVA MTLEQMYGAH LLPGIWQWTW LIEAIALTLG AAFAACLPLY LDLTRQALAQ GANRYQQMQA HRKTHSIQFA LACGLLTVAA LLFPFSQSYN ISLVLLGIVA IAIPLLLPQL LHWGVSALMP LARPGLWQYL LAETRELIAP LSLAMMAILL ALSANVSMNT LVGSFEQTLR TWLETRLHAD LYIRPPSQRI DTIQTQLMHD PGVSGLYQQW QIEAQLSLPV STDNSSAQTI PISLLSRDEY SIRHTSALKE SLPTLWQSYF NAPVILVSEP LAIKYQLQLG DSVSLDALKK TGNSQAIIGG IYYDHGNTRN EVIISQPLWQ KAQLPVLPIS LAANFYGKER GSKISETDLD ELQIQLAAEL GLSQAQIYSQ TKIKTQAIAM FKRTFSITLV LNSLTLIVAA IGLFSACLML TQARQAPLAR LYSLGVSRNA LRGMVFMQML IVVLITCLLA MPTGALLGYL LINKITLQAF GWTIKMIWDW QAYGKAILIA LTTCTLAVLL PLYWQTRKPL VASLQQETL
|
| |