| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal_3505 |
|---|
| Symbol | |
|---|
| ID | 4845753 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS155 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009052 |
|---|
| Strand | - |
|---|
| Start bp | 4105297 |
|---|
| End bp | 4110651 |
|---|
| Gene Length | 5355 bp |
|---|
| Protein Length | 1784 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640120770 |
|---|
| Product | multi-sensor hybrid histidine kinase |
|---|
| Protein accession | YP_001051851 |
|---|
| Protein GI | 126175702 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGACAAAA GTAAACTTCG TACTTTTCGC AGCAGAATCT TATCCCACAT AGCCTTGCCT
CTCATTTTAA TCATGGCGAG TGTTTATGCT GTCAATGCTT GGTTTAGTTA TCTCTCCTCG
GAGAAACGGC TCTACCATAG CCTTACGCAG GAGGCGAGTC ACTCGGCTTC GCGTCTGCAA
TTGTTACTCG AGCACGCACA AGCAAATACC CAAGGCCTTG CTGATTTTAT TGGTTTTTTG
TCAAGCAAAG AAGACATGAA TGACACTGAG AGTGTTAAAA GTGTCTTGAT GAATCGACTC
AAACGTAATC CTGATTTCTT TGGCTCCGCA GTCGCGTTTA AACCCAACAC CTTTCCCAAT
CGCAAACTCT TTTCTCCCTA TGTTTACCGC GACACCAGTG GTAGCGACGA TCTCCATTAT
CTCGATATTG GCGCCGAGGG TTACGATTAT ACCGATGGCA CTTGGGACTG GTGGAACAAT
GCCATCAATC AAGCGGCGGG CTACTGGTCA AAGGCGTACT TTGATGAGGG GGCGGGCAAT
ATTCTGATGG TGACTTATTC GGCTCCTTTT GGTGAGGCGG AGCATTATTT TGGTGTCGCG
ACGGTTGACT TAGCGCTAGA TGGCTTGCCA AAGCAATTAG GAATTGCGCC TAATCGGCTG
GTGGTTTTAG ACGATCAAGG GCGACTGATT TATCATGTCG ATAGGGAAAA AGTGTTGGCC
ACGACTTCAA CACAGTGGCT CGATAAAAAT AAATATAGGA ATGCTGACTT TTGGGCCTTA
CAAGCGAAAG GACTTGATGG TCAGGCAAGG TTTGTTGACG ATAAGGATGT GGTTTACCTC
GCGAGTATTG CAACCGTTCC GCAGCTAAAA TGGCGCGTCA TAGTGCTAGC GCCAGAGCAA
GAATTATTCA GTTCCCTGCT CGATGATATG GCATCCATAA TACTCAATTT GAGTTTGCTA
ACCCTCTTAT TATTGTTGAC TTGCTATCTG GCCGCTAAGC GACTGACTCG GCCCTTAGAG
CTACTCGAGT CGGGTATCTT GTCCTTTGGG CAGGGTAAAA CCCAGCAGCT CATTGTGCCT
AAAGGCGCCG TGAGTGAGAT TGTGACGCTG AGCAATACCT TCAATCAAAT GGCGGAATTA
CTCGCCGAAC GTGAGCAAGC CATTCTTGAT TCCCGTGGCA ACCGCTTTGC TCGTTTGATT
GATGGTATGA GTGATAAGTC TTTCTATTGT TCCCTCGATC CTGATGGCCA ACTAGCGCAA
GTGAGCGAGG GGGTGACTAA GGTGCTGGGG ATTTCCCCTG ATCTGCTCAA GCGCAAATAC
CAAAGACTGT TTTCGGCCAA TCCCCTCAAT GAGAAAAACT GGCAATACAC TGATTTTGCT
TTAAAAGGCC AAAATGTTCC TTCGCATCAA GTGGAAATGC TGGATGATCA AGGGCATTTA
AGAAGGCTCG ATGTGTTTAT GCAGCCATTA ATGTCTGACA CCGGTGAGTT AATGTCGGTC
GAGATGTTAT TTACCGATGT GACAGAGCAG TTCTCAGCGG CGGTCTGGTC AAATGCGGTA
CTGGAAGCCG CGCCCGAGGC CATGTTGATT GTCGATGAGC TAGGGCAAAT CGTGTTCACT
AACAGTCGCT GTCTACAGCT CTTTGGATAC GAAACGGGCG CTATGCTGGG GTTGCAGGTT
GAGGCGTTAT TGCCGCAAGA ATATGGAGAA AGGCATGTAC TTGAACGGCA AACATTCCTG
CGAGAAGGCC GTGATAGAAG CATGGCAAAT GCCCGTCATG TGCGGGCGTT AAAAGCCGAT
GGTAATGAAT TTATTGCGGA AATAGCGCTG AGTATTCTTC CCACCGCCTT TGATGGACAG
AGGCAAGTGG CGGCTTCAAT ACGCGATATG ACACAAAAAC TGGCCGTTGA GCAGAAAATC
CGTGATAGCG AACAGCGTTT TCGTGGGCTA GTGACGAATA TTCCCGGCGC TGTTTATCGG
ACTCGCATCG GGGATGTATG GTTCATGGAA TATATCAGTG ACAATATTGC CGAGATTACG
GGTTATGCAG CGAGTCAGTT TATTGAAAAT CGCCAACGTA CCTTTGCTTC GCTGATTTTA
GAGGAGGATA GGCCTACATG TCATTTGCAT ATTGATAGAG CACTCGCGCA GCAAGAAACC
TTTGAAGTGG AATATCGTAT TCGCCACCGC GATGGCAGTA TTCGCTGGGT ACATGAGAAA
GGTAAGGCGA GTTATACCGA AGAGGGCATT CCACTCTGGT TTGACGGCAG TATCGACGAT
ATTACCGAGA GTAAACTCGC GCTGGTACAG TTAGAGCAAT CGCGTCAACA GATGACCAAT
ATTACTGAGT CTATTCCTTG CACTGTGTAT CAATTGCAGT GGCACTCGCC TATAGACCGA
AGATTTACCT TCCTCTCTGG TGCGGCAATG AAGATGCTTG GGCTGCATCG CGATGATCTG
ATGAGTAATT TTGACATCAT AGCCGAGCGG ATTTTTGATG AAGAAAGGCC CGATGTTGTG
CGGGCCTTGT CGGGTCAGAG TGAAGACAGA CTGCAATGGA TACGCGAGTT TCGCTATCGC
CACCCTAATG GCAGCATACG TTGGATGGAA GCGGGCGCGA GCGGTCATTT GGGTGAAGAG
GGTGCCATCA CGTGGAATGG TTATGTGATG GACATTACCC AACGCAAAAC CATAGAGCAA
GAGTTAGCTC TCAGTGAGGC GCACTTTAAG GCGCTGTTCG ATGGGGCGAC CATTGGCATA
GTCAATGTTG ATATTAAAGG CGTTATTTTA GATTGTAATG ACCAATTCTG TGCCGATATG
GCGCTGTCAC GTAACCATTT ACGTAATACT GCTATTTTTG AGGTTCTCAG TGAGCAAGAT
CAACCCATAG CCAAGGCGCA ATTTCAGGAG TTGGTTGAAG GTAAGATTGA CCATTATCGC
GGCGAGCGCA GTTTTATTCG TCCTTCCGGT GCGCCTTTGT GGATGACAGT CAATGTGTCG
GCACTGCTTG ATGCCCAAGG ACAATTTGAA TCGGCCGTGA TCAGCATGGT CGATATGACA
GAGCTTAAAT TGCTCTCAGA TGAACTGTTA CTCGCCAAAG AGCAAGCCGA TGCGGCCAGT
AAAGCCAAAG GTGACTTCTT GGCGAATATG TCCCACGAAA TCCGTACTCC AATGAATGCC
ATTATTGGCA TGTCCCAGCT GTGCTTGCAG ACCGAATTAG ATAAAAAACA GAAGAATTAT
GTAGAGAAGA TTGAGCGGGC ATCGCAGTCT TTGCTGTCGA TTATCAATGA CATTCTGGAT
TTCTCTAAGA TTGAAGCGGG TAAGTTAGAT ATAGATTCAG TACCTTTTCA GCTCGATACT
ATGTTGGAAG ATCTCAGCGA TATGTTTTCT GAGAAAGCTG CCCACAAACA GATTGAATTA
TTGTTCGCCG TTGCGCCCAA CGTGCCTCGT TATCTGTTAG GGGATTCGCT GCGATTAGGC
CAAGTCTTGA TTAACCTGAT GAATAACGCC ATTAAGTTCA CTGAACGCGG TGAGGTCTTG
CTGTCGCTAA GCTTAGTTGA GCAGCAAGAT GATGATGTCG TGCTGCGTTT TAGCGTGCGT
GACAGCGGCA TAGGCTTAAC TGAGCAGCAG CAAGCAAAAT TGTTTAAATC CTTTACCCAA
GCGGATACTT CAACCACCCG TAAATACGGT GGCACAGGTT TAGGTTTGGC TATCTGTAAG
CAGCTAGTCG AACTCATGGG CGGGAAGATA GGGGTTGAAA GTCAGTTCGG TCATGGCAGC
ACTTTCTATT TCACGGTCAA GTTGCACATT TCCGATGGTC AGAAATTAGT ACTCGAGCAA
GAGCTTGAGG GCATGTCTGT GCTGGTGGTC GATGATAACG CGACCGCTAG AGATATTATG
CGCACTACGC TCGAAAGTAT GGGCTTTAGG GTCGATACGG TTCGCTCGGG TGAAGAAGCG
ATAAGCCGCT GCCTACTGCA AGCCTATGAA GTGGCGTTAA TTGATTGGAA AATGCCCAAC
ATGGATGGGC TGGAAACCGC GCGTCAAATC CAATTGCAGG CTCAGTCGCA ATCTCAATCA
CAACCTCAGT CTCATCCTCA GCCCAAAATA TTGATGGTAT CTGCCCATGC GGATCATGAG
TTCCTCACTC AAATTGAGCA ACTGGCTTTA GCTGGATACA TCAGTAAACC CATCAGTGCC
TCACGCTTAC TCGACGGCAT AATGAATGCG ATTGGCCGCG AAGGCATATT GCCCGTGAGG
CGCCGCACCG AAGAGTTGGC TCCGCAGTTG TTAGTGCCAC TGCAAGGGAA GCGTATCCTA
TTAGTGGAAG ATAACGAGAT GAATCTCGAA GTCGCCAGCG AGTTTTTAGA GCAAGTGGGG
ATTATTCTAT CCATAGCGAC CAATGGTCAA ATCGCCTTAG ACAAACTGTC GCAGCAGCAT
TTCGATCTAG TATTAATGGA CTGCCAAATG CCGGTGATGG ATGGCTACCA AGCCACTCAG
GCGATAAGAA AAAGGCCTGA GTTGGCAAAT TTACCCGTCG TCGCCATGAC TGCCAATGCG
ATGGCTGGCG ATAGGGACAT GTGCATCAGG GCGGGCATGA ACGACCATAT AGCCAAACCG
ATAGAAGTGA ATGTTCTCTA TCAAACCCTG TTGAAATACC TCGCACCCGC ATCAGAAACG
GCTGCAGTAG ATACCTTTAC TCAATCGATA TTGAGTAACA CTAAGGGTGA GGCAGGCAAT
AGTGCAGAAC AAACCGTATT GCTTAAGTGG CCAGAGCACC CAGAGCTGGA TATCGATAGA
GGTTTGCAAC TGGTGCAACA CTCTACGCGG CTTTATCAAC GCATATTTGA TCGTTTCGTG
AGCAGTCAGC GTAATGTGGT GGAACAGGTT CGCAAAGCTA TCGCGGCGAA TCAAATCGAA
GATGCGGTGC GTATTGCCCA TACCCTTAAA GGCTTAGCGG GCAATTTAAG CTCGGCTAAA
TTGGTGGAGT TAGCGCGTTT ACTTGAGTTG CATTTAACTG AAAATGCGCC CTTTGAAGAT
GAGTTAGTTC AAATTCAACC GCTAGTGGCT TCTATTTGTG ATGCGATTGA ATACGCCAAA
CCCGCTGCGG TGAATCAAGC CGAACCCCAA GCCGTTGATT TGTTATCTGC TGAGGATTTA
AGGGCGGCAT TACAGGCCTT GCGGCAGAAC TTAGATGATG CCGATGCCAG CGCAGTGGCA
AAAATTGATG CCTTAAAGCC GCAGGTGAAC AGTGCAATGT GGCAAGCGTT AAGCCCTGCC
TTGTCTATGA TTAATCAGTA CCAGTTTGAT GAGGCGATCG ACTTGATTGA TGATGTCATT
GCTCAGTTAG GATAA
|
|---|
| Protein sequence | MDKSKLRTFR SRILSHIALP LILIMASVYA VNAWFSYLSS EKRLYHSLTQ EASHSASRLQ
LLLEHAQANT QGLADFIGFL SSKEDMNDTE SVKSVLMNRL KRNPDFFGSA VAFKPNTFPN
RKLFSPYVYR DTSGSDDLHY LDIGAEGYDY TDGTWDWWNN AINQAAGYWS KAYFDEGAGN
ILMVTYSAPF GEAEHYFGVA TVDLALDGLP KQLGIAPNRL VVLDDQGRLI YHVDREKVLA
TTSTQWLDKN KYRNADFWAL QAKGLDGQAR FVDDKDVVYL ASIATVPQLK WRVIVLAPEQ
ELFSSLLDDM ASIILNLSLL TLLLLLTCYL AAKRLTRPLE LLESGILSFG QGKTQQLIVP
KGAVSEIVTL SNTFNQMAEL LAEREQAILD SRGNRFARLI DGMSDKSFYC SLDPDGQLAQ
VSEGVTKVLG ISPDLLKRKY QRLFSANPLN EKNWQYTDFA LKGQNVPSHQ VEMLDDQGHL
RRLDVFMQPL MSDTGELMSV EMLFTDVTEQ FSAAVWSNAV LEAAPEAMLI VDELGQIVFT
NSRCLQLFGY ETGAMLGLQV EALLPQEYGE RHVLERQTFL REGRDRSMAN ARHVRALKAD
GNEFIAEIAL SILPTAFDGQ RQVAASIRDM TQKLAVEQKI RDSEQRFRGL VTNIPGAVYR
TRIGDVWFME YISDNIAEIT GYAASQFIEN RQRTFASLIL EEDRPTCHLH IDRALAQQET
FEVEYRIRHR DGSIRWVHEK GKASYTEEGI PLWFDGSIDD ITESKLALVQ LEQSRQQMTN
ITESIPCTVY QLQWHSPIDR RFTFLSGAAM KMLGLHRDDL MSNFDIIAER IFDEERPDVV
RALSGQSEDR LQWIREFRYR HPNGSIRWME AGASGHLGEE GAITWNGYVM DITQRKTIEQ
ELALSEAHFK ALFDGATIGI VNVDIKGVIL DCNDQFCADM ALSRNHLRNT AIFEVLSEQD
QPIAKAQFQE LVEGKIDHYR GERSFIRPSG APLWMTVNVS ALLDAQGQFE SAVISMVDMT
ELKLLSDELL LAKEQADAAS KAKGDFLANM SHEIRTPMNA IIGMSQLCLQ TELDKKQKNY
VEKIERASQS LLSIINDILD FSKIEAGKLD IDSVPFQLDT MLEDLSDMFS EKAAHKQIEL
LFAVAPNVPR YLLGDSLRLG QVLINLMNNA IKFTERGEVL LSLSLVEQQD DDVVLRFSVR
DSGIGLTEQQ QAKLFKSFTQ ADTSTTRKYG GTGLGLAICK QLVELMGGKI GVESQFGHGS
TFYFTVKLHI SDGQKLVLEQ ELEGMSVLVV DDNATARDIM RTTLESMGFR VDTVRSGEEA
ISRCLLQAYE VALIDWKMPN MDGLETARQI QLQAQSQSQS QPQSHPQPKI LMVSAHADHE
FLTQIEQLAL AGYISKPISA SRLLDGIMNA IGREGILPVR RRTEELAPQL LVPLQGKRIL
LVEDNEMNLE VASEFLEQVG IILSIATNGQ IALDKLSQQH FDLVLMDCQM PVMDGYQATQ
AIRKRPELAN LPVVAMTANA MAGDRDMCIR AGMNDHIAKP IEVNVLYQTL LKYLAPASET
AAVDTFTQSI LSNTKGEAGN SAEQTVLLKW PEHPELDIDR GLQLVQHSTR LYQRIFDRFV
SSQRNVVEQV RKAIAANQIE DAVRIAHTLK GLAGNLSSAK LVELARLLEL HLTENAPFED
ELVQIQPLVA SICDAIEYAK PAAVNQAEPQ AVDLLSAEDL RAALQALRQN LDDADASAVA
KIDALKPQVN SAMWQALSPA LSMINQYQFD EAIDLIDDVI AQLG
|
|---|
| |