Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal_3368 |
Symbol | metH |
ID | 4842207 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS155 |
Kingdom | Bacteria |
Replicon accession | NC_009052 |
Strand | + |
Start bp | 3934781 |
End bp | 3938482 |
Gene Length | 3702 bp |
Protein Length | 1233 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 640120633 |
Product | B12-dependent methionine synthase |
Protein accession | YP_001051714 |
Protein GI | 126175565 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0646] Methionine synthase I (cobalamin-dependent), methyltransferase domain [COG1410] Methionine synthase I, cobalamin-binding domain |
TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain [TIGR02082] 5-methyltetrahydrofolate--homocysteine methyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGCAGACA TTCGTAAACA GCTTGCTGAG CGCATTCTAA TCTTAGACGG TGCCATGGGC ACTATGATCC AAGACCACAA GCTCGAAGAA GAGGATTATC GCGGCGAACG CTTTAAAGAT TGGCACACTG ACGTCAAAGG CAACAACGAT TTATTGGTAT TGTCGCAACC CCACATCATC AAAAAAATTC ACACCGACTA CTTAAACGCC GGTGCCGACA TCATTGAAAC CAACACCTTT AATGCTACGA CTATCGCCAT GGCCGACTAT GACATGCAGT CGTTGTCCGC CGAAATTAAC TTAGCCGGTG CCCGTCTTGC CCGTGAAGCC TGTGATGAAG TGTTTGCTGC CACAGGCATT CCACGTTACG TCGCTGGTGT GTTAGGCCCC ACTAACCGTA CGTGTTCGAT CAGCCCCGAT GTGAACGACC CTGGCTATCG CAATGTCAGC TTCGATGAGT TAGTGAGCGC TTACCGAGAA TCCACTAAGG CGCTGATTGA AGGCGGCGCG GATATCATTA TGGTCGAGAC CATATTTGAT ACCTTAAACG CCAAGGCCGC ACTGTTTGCG ATTGAATCGG TATTTGATGA CTTATTTGGT CAGCATTCTA AAGACAGATT ACCGATCATG ATTTCGGGCA CCATTACCGA TGCCTCAGGC CGCACCCTTA CCGGCCAAAC CACCGAAGCT TTTTATAATT CCCTGCGCCA TATCAAGCCG TTATCTATCG GTCTTAACTG TGCACTCGGG CCAAAAGAGC TGCGCCCGTA CGTCGAAGAA TTATCCCGTA TAGCCGAATG TTATGTGTCG GCGCATCCGA ACGCGGGCCT GCCGAACGAG TTTGGCGGCT ATGATGAAAC CCCAGAGGAC ATGGCGAACG TGATTGAAGA TTGGGCGCGC GAAGGCATGC TCAATATTAT CGGTGGTTGC TGTGGTAGTA CGCCTGAACA TATCCGCGTT ATTCGCGAAG CGGTCGACAG ACATAACCCG CGCGTCTTGC CCAATATCCC CGTAGCCTGC CGCTTAGCCG GTTTGGAACC ACTGACTATC GATGCCCAAT CCTTGTTCGT TAACGTGGGT GAGCGCACCA ACGTTACAGG TTCGGCCAAG TTTTTAAAGC TGATCAAAGA CGGTAAGTTT GAGCAAGCCC TCGATGTCGC TCGCGAGCAG GTCGAGAGCG GCGCGCAGAT CATCGACATC AACATGGACG AAGGCATGCT CGATGGCGCC GAGATCATGC ACAAGTTTTT AAACTTGATT GCCTCTGAGC CCGACATCAG CCGCGTGCCA ATTATGATCG ACTCCTCTAA GTGGGAAGTC ATCGAAGCTG GTCTTAAATG TATTCAAGGC AAAGGCATAG TTAACTCGAT TTCCCTTAAA GAAGGCGAAG CCAAGTTTAT TGAGCAAGCC ACCTTAGTCA AACGCTACGG CGCGGCGGCC ATTATCATGG CATTCGACGA ACAAGGTCAG GCCGATACTA AGGCGCGTAA AATCGAAATC TGTACCCGCG CTTATCGGGT GCTGGTTGAT AAGGTCGGCT TTCCGCCAGA AGACATCATC TTCGACCCGA ACATTTTTGC CATCGCCACG GGTATCGATG AACACGACAA CTATGCCGTC GATTTTATTG ATGCCATTAA AGCGATTAAA GCCACCCTGC CCCACGCGAT GATTTCGGGC GGCGTGTCGA ATGTGTCGTT CTCGTTTCGC GGTAACAACC CAGTGCGCGA GGCGATTCAC GCGGTATTCC TGTACCACGC CATCAAAGTC GGCATGGACA TGGGCATTGT CAACGCGGGT CAGTTAGCCA TTTACGACGA TATCGATCCT GAGCTTAAAG TACGGGTCGA AAACGTGGTG CTTAACTTGC CCTGCCCAGT CGAAGGCTCA AGCAATACCG AGCAGTTACT TGAAATCGCG GAGAAATTCC GCGGTGATGG CGCACAGGTG GGTAAAAAAG AAGATTTAGA ATGGCGCAGC TGGCCGGTGA GCCAACGCTT ATCCCATGCG CTCGTCAAAG GCATTACCGA ATTTATTGAT GAAGATACCG AAGCCGCTCG CCAAGAAGCG AAACGTCCGC TGGATGTGAT TGAAGGCGCC TTGATGGACG GCATGAACGT AGTCGGCGAC TTGTTCGGCT CGGGCAAGAT GTTCCTGCCG CAGGTGGTAA AATCGGCGCG AGTAATGAAA AAAGCCGTGG CTTACTTAAA CCCCTATATC GAGCTGGAAA AGGTCGAAGG CCAATCTAAC GGCAAGATCT TGATGGTGAC GGTAAAAGGT GACGTGCACG ATATTGGCAA GAATATCGTC GGCGTGGTGC TCGCCTGTAA CGGTTTTGAG GTATTCGATT TAGGTGTGAT GGTGTCAGTG GAGCGAATTC TCGACGCCGT GAAAGAACAC AATATCGATA TCATCGGCAT GTCGGGCCTC ATCACGCCGA GTCTGGACGA GATGGTGCAT AACGTGAAAA CCTTCCACCG CGAAGGCTTA ACCATTCCGG CGATTATCGG CGGCGCCACT TGCTCGAAAA TCCACACAGC GGTGAAGATT GCGCCCCATT ATCCCCATGG CGCGATTTAT ATCGCCGATG CGTCCCGCGC CGTGCCTATG GTGAGTAAGC TCATCAACAA CGAGACTCGC CAAGCGACCA TAGACGAAAC CTATGCCGAA TACGACGACA TGCGCACTAA GCGTTTATCC CAAGCCAAGC GCAAAGAGAT AGTGTCACTC GAAGCGGCGC GTGAAAACCG CTGCCAACAC GATTGGGCCA ACTACACCCC GTTCACGCCA AACGTGCTCG GTCGCCAAGT ATTTAATAAT TATCCATTAG AAGACTTAGT CGAGCGTATC GACTGGACAC CGTTTTTCCG CTCGTGGGAA CTGCACGGCC ATTACCCTGA AATCCTCACC GATAAAGTGG TCGGTGAAGA AGCGCAAAAG CTGTTCGCCG ATGGTCAGGC CATGCTCAAA CAAATTATCG AAGAAAAGTG GCTCACGGCG AAAGCAGTTA TCGGCTTATT CCCTGCCAAT ACCGTCAATT ACGACGACAT TGAGCTGTAT ACCGATGAGT CGCGCACCAC AGTCGAAATG ACCACACATC ACCTGCGGAT GCAGCTTGAG CGTGTCGGCA ACGACAACTT CTGTCTATCT GACTTTGTTG CACCAAAAGA CTCAGGCGTC GCCGATTACA TGGGCGGCTT TGCGGTGACT ACAGGCCACG GCATAGACGA ACATGTGGCG CGTTTTGAAG CCAACCACGA CGACTACAAC GCCATCATGC TCAAATGCTT AGCCGACCGT TTGGCCGAAG CCTTTGCCGA GCGGATGCAC GAACGGGTAC GTAAAGAGTT TTGGGGTTAT GCGGCCGACG AGCAGTTAAG TAACGAAGCC TTAATACGCG AGAAATACAA AGGCATACGC CCCGCACCCG GTTACCCAGC TTGCCCAGAC CACACAGAAA AAGGCTTGTT ATGGGACTTG CTCAAGCCCG ATGAAACCAT CGACTTGAAC ATCACCGAAA GCTACGCCAT GTTCCCCACA GCGGCAGTAT CGGGCTGGTA TTTCGCCCAC CCGAAATCGC GCTACTTTGG CGTGAGTAAC ATCGGCCGCG ATCAAGTGGA AGATTATGCC AAGCGTAAAG GGATGACTGT AGCTGAGACG GAGAAGTGGC TGGCGCCAGT GTTGGATTAT GACCCTGAAT AG
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Protein sequence | MADIRKQLAE RILILDGAMG TMIQDHKLEE EDYRGERFKD WHTDVKGNND LLVLSQPHII KKIHTDYLNA GADIIETNTF NATTIAMADY DMQSLSAEIN LAGARLAREA CDEVFAATGI PRYVAGVLGP TNRTCSISPD VNDPGYRNVS FDELVSAYRE STKALIEGGA DIIMVETIFD TLNAKAALFA IESVFDDLFG QHSKDRLPIM ISGTITDASG RTLTGQTTEA FYNSLRHIKP LSIGLNCALG PKELRPYVEE LSRIAECYVS AHPNAGLPNE FGGYDETPED MANVIEDWAR EGMLNIIGGC CGSTPEHIRV IREAVDRHNP RVLPNIPVAC RLAGLEPLTI DAQSLFVNVG ERTNVTGSAK FLKLIKDGKF EQALDVAREQ VESGAQIIDI NMDEGMLDGA EIMHKFLNLI ASEPDISRVP IMIDSSKWEV IEAGLKCIQG KGIVNSISLK EGEAKFIEQA TLVKRYGAAA IIMAFDEQGQ ADTKARKIEI CTRAYRVLVD KVGFPPEDII FDPNIFAIAT GIDEHDNYAV DFIDAIKAIK ATLPHAMISG GVSNVSFSFR GNNPVREAIH AVFLYHAIKV GMDMGIVNAG QLAIYDDIDP ELKVRVENVV LNLPCPVEGS SNTEQLLEIA EKFRGDGAQV GKKEDLEWRS WPVSQRLSHA LVKGITEFID EDTEAARQEA KRPLDVIEGA LMDGMNVVGD LFGSGKMFLP QVVKSARVMK KAVAYLNPYI ELEKVEGQSN GKILMVTVKG DVHDIGKNIV GVVLACNGFE VFDLGVMVSV ERILDAVKEH NIDIIGMSGL ITPSLDEMVH NVKTFHREGL TIPAIIGGAT CSKIHTAVKI APHYPHGAIY IADASRAVPM VSKLINNETR QATIDETYAE YDDMRTKRLS QAKRKEIVSL EAARENRCQH DWANYTPFTP NVLGRQVFNN YPLEDLVERI DWTPFFRSWE LHGHYPEILT DKVVGEEAQK LFADGQAMLK QIIEEKWLTA KAVIGLFPAN TVNYDDIELY TDESRTTVEM TTHHLRMQLE RVGNDNFCLS DFVAPKDSGV ADYMGGFAVT TGHGIDEHVA RFEANHDDYN AIMLKCLADR LAEAFAERMH ERVRKEFWGY AADEQLSNEA LIREKYKGIR PAPGYPACPD HTEKGLLWDL LKPDETIDLN ITESYAMFPT AAVSGWYFAH PKSRYFGVSN IGRDQVEDYA KRKGMTVAET EKWLAPVLDY DPE
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