Gene Sbal_3293 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal_3293 
Symbol 
ID4841516 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS155 
KingdomBacteria 
Replicon accessionNC_009052 
Strand+ 
Start bp3855222 
End bp3855884 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content47% 
IMG OID640120561 
Productribose-5-phosphate isomerase A 
Protein accessionYP_001051642 
Protein GI126175493 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0120] Ribose 5-phosphate isomerase 
TIGRFAM ID[TIGR00021] ribose 5-phosphate isomerase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.272189 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTCAAG ATGAAATGAA AAAAGCTGCC GGTTGGGCCG CACTCAAGTA CGTTGAAAGA 
GACAGTATTG TTGGTGTTGG TACTGGTTCG ACTGTGAATC ACTTTATTGA TGCACTGGCG 
ACCATGAAAG CTGATATCGA AGGCGCAGTC TCTAGTTCTG AGGCATCAAC TCAGAAAATG 
AAAGCGCTGG GTATTCCCGT TTATGACTTA AACAGCGTCG ATCGTTTATC TGTCTATGTG 
GACGGTGCCG ATGAAATCAA CGACCGTATG GATATGATCA AAGGGGGCGG CGCGGCGTTA 
ACTCGCGAGA AAATTGTTGC GGCTGTGGCT GAAAAATTTA TCTGTATCGT GGATAACACT 
AAGCAAGTCG ACATCCTAGG GGAATTCCCA CTGCCAGTTG AAGTCATTCC TATGGCGCGC 
TCTTATGTGG CACGTCAGTT AGTTAAGCTA GGCGGCGATC CTGTGTACCG TGAAGGCGTT 
GTGACCGATA ACGGCAACGT GATCCTCGAT GTGTACAATC TTAAGATCCT TAATCCAAAA 
GAATTGGAAA GTCAGATCAA TGAGATAGTC GGTGTCGTCA CTAACGGTCT GTTCGCTAAA 
CGCGGCGCAG ATGTGTTGTT AGTCGGTACA CCTGATGGCG TAAAAACCTT TACCGCCGAA 
TAA
 
Protein sequence
MTQDEMKKAA GWAALKYVER DSIVGVGTGS TVNHFIDALA TMKADIEGAV SSSEASTQKM 
KALGIPVYDL NSVDRLSVYV DGADEINDRM DMIKGGGAAL TREKIVAAVA EKFICIVDNT 
KQVDILGEFP LPVEVIPMAR SYVARQLVKL GGDPVYREGV VTDNGNVILD VYNLKILNPK 
ELESQINEIV GVVTNGLFAK RGADVLLVGT PDGVKTFTAE