Gene Sbal_3246 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal_3246 
Symbol 
ID4844456 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS155 
KingdomBacteria 
Replicon accessionNC_009052 
Strand
Start bp3806054 
End bp3808027 
Gene Length1974 bp 
Protein Length657 aa 
Translation table11 
GC content47% 
IMG OID640120506 
ProductATP-dependent metalloprotease FtsH 
Protein accessionYP_001051595 
Protein GI126175446 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0465] ATP-dependent Zn proteases 
TIGRFAM ID[TIGR01241] ATP-dependent metalloprotease FtsH 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000231825 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGGTCTA GTAATTTGAG TGACATGGCA AAAAATCTAA TACTCTGGGT TGTCATCGCC 
GTTGTGCTGA TGTCAGTGTT TCAGGGTTAC TCCCCCTCTT CTTCGTCATC GCAGAAGATG
GATTATTCTA CCTTCTTAGA TAATGTCCGT GATGGGCAGG TCGCAACTGT TGAAGTTAAA
AGCGACCAAC GTACTATTGA AGGTGCTAAG CGAACGGGTG AAAAGTTCAC GACTATCATG
CCGTTATATG ACCAAGATTT AATTAATGAT CTTGATCGTA AAGGCATCAC TATGAAGGGC
CAAGAAGCCG AAGAATCTGG GTTCCTAACC CAAATATTCA TCTCTTGGTT CCCTATGTTA
TTGCTTATCG GGGTATGGAT TTTCTTCATG CGCCAGATGC AAGGCGGCGG TGGCAAAGGC
GCTATGTCCT TTGGTAAGAG CAAAGCCAAG CTGATGAGCG AAGATCAGAT TAAAACGACG
TTTGCCGATG TTGCTGGTTG TGACGAAGCA AAAGAAGAAG TCAAAGAGTT AGTTGATTAT
CTGCGTGACC CAACTAAATT CCAAAAATTG GGCGGCCGTA TTCCAACGGG CGTGCTGATG
GTGGGTCCTC CAGGTACAGG TAAAACCTTG CTGGCGAAAG CCATTGCGGG TGAATCTAAA
GTACCTTTCT TCACTATCTC GGGTTCTGAT TTCGTTGAAA TGTTCGTTGG TGTTGGTGCA
TCCCGTGTGC GTGACATGTT CGAACAAGCG AAAAAGTCTG CGCCTTGTAT CATCTTTATC
GATGAAATCG ATGCGGTAGG TCGTCAACGC GGCGCGGGTT TAGGTGGTGG TCATGATGAA
CGTGAGCAAA CACTGAACCA AATGCTGGTT GAGATGGACG GCTTCGAAGG TAATGAAGGC
GTTATCGTTA TCGCGGCAAC TAACCGTCCA GACGTACTCG ATTCTGCACT GCTGCGTCCA
GGTCGTTTTG ACCGTCAAGT GGTCGTTGGC TTACCAGACG TTCGTGGTCG TGAGCAGATT
TTGAAAGTGC ATATGCGTAA AGTACCGCTT TCTGAAGATG TGAAGGCGAG TGTAATTGCC
CGTGGTACAC CAGGTTTCTC TGGTGCTGAC TTAGCTAACT TAGTGAACGA AGCGGCCCTG
TTTGCGGCTC GTGGAAATCG CCGAGTAGTG GGTATGGAAG AATTTGAGCG TGCTAAAGAT
AAAATCATGA TGGGTGCTGA GCGCCGTTCT ATGGTGATGT CTGAAGCTGA AAAAGAAATG
ACTGCATACC ACGAAGCGGG CCATGCAATT GTAGGTTGTT TAGTACCAGA GCACGATCCT
GTGCACAAGG TCACTATCAT TCCTCGCGGC CGTGCGCTGG GTGTCACTTT CTTCTTACCC
GAAGCTGACT CAGTGAGCCA GAGCCGTCGT AAGTTAGAAA GCCAAATTTC AGTCGCCTAC
GGTGGTCGTT TAGCTGAAGA GCTTATTTAC GGTACAGAAA AAGTGTCGAC TGGTGCATCA
CAGGACATCA AATACGCGAC CTCTATTGCG CGTAACATGG TGACTCAGTG GGGCTTCTCG
GACAAGCTAG GTCCATTATT GTATGCCGAA GAAGACGGTG AAGTGTTCTT AGGTCGCAGT
ATGGGTAAAG CCAAAGCCAT GTCCGATGAA ACAGCAACTA TCATCGACGC TGAAGTGAAA
GTCTTTATCG ACAAGAACTA CGCGAGAGCG AGGCAGATAT TGACGGATAA CCTCGATATT
CTGCACTCGA TGAAAGAAGC TCTAATGAAG TATGAAACCA TTGATTCACT TCAAATTGAC
GATTTAATGA AGCGTCGTGA AGTGCGCCAA CCTGCCGATT GGCAAGTGGA TGACCATGGT
TCTAACGACA AAGGCAGCGG TCATGGTGAG CCAGCTGAGA AAGCTGAAGA TACTGTGACT
ACAGCGTCTG CTGAACCAGA CTTGAAAGAG CCTGATGAAT CACCTGCTAA GTAA
 
Protein sequence
MRSSNLSDMA KNLILWVVIA VVLMSVFQGY SPSSSSSQKM DYSTFLDNVR DGQVATVEVK 
SDQRTIEGAK RTGEKFTTIM PLYDQDLIND LDRKGITMKG QEAEESGFLT QIFISWFPML
LLIGVWIFFM RQMQGGGGKG AMSFGKSKAK LMSEDQIKTT FADVAGCDEA KEEVKELVDY
LRDPTKFQKL GGRIPTGVLM VGPPGTGKTL LAKAIAGESK VPFFTISGSD FVEMFVGVGA
SRVRDMFEQA KKSAPCIIFI DEIDAVGRQR GAGLGGGHDE REQTLNQMLV EMDGFEGNEG
VIVIAATNRP DVLDSALLRP GRFDRQVVVG LPDVRGREQI LKVHMRKVPL SEDVKASVIA
RGTPGFSGAD LANLVNEAAL FAARGNRRVV GMEEFERAKD KIMMGAERRS MVMSEAEKEM
TAYHEAGHAI VGCLVPEHDP VHKVTIIPRG RALGVTFFLP EADSVSQSRR KLESQISVAY
GGRLAEELIY GTEKVSTGAS QDIKYATSIA RNMVTQWGFS DKLGPLLYAE EDGEVFLGRS
MGKAKAMSDE TATIIDAEVK VFIDKNYARA RQILTDNLDI LHSMKEALMK YETIDSLQID
DLMKRREVRQ PADWQVDDHG SNDKGSGHGE PAEKAEDTVT TASAEPDLKE PDESPAK