| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal_3228 |
|---|
| Symbol | |
|---|
| ID | 4842567 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS155 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009052 |
|---|
| Strand | - |
|---|
| Start bp | 3783970 |
|---|
| End bp | 3784875 |
|---|
| Gene Length | 906 bp |
|---|
| Protein Length | 301 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 640120486 |
|---|
| Product | nucleoside-specific channel-forming protein Tsx |
|---|
| Protein accession | YP_001051577 |
|---|
| Protein GI | 126175428 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3248] Nucleoside-binding outer membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.00000000169174 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAACG TTAAAACTTT AGCTTTAGCC GCTACTGCTG TAGCTGCAAT ATCTGGCAAC
GCATTTGCCG CTGACCGTTC TGATATCTAC GCAACAGATT ACAAGTGGAT GCAGTTCAAC
GCTATGTACT CTGTTGATGA GCACCCAATT GCTGATGGTG CCGATGCTCA CCATAACTAC
TTAGAAATGG AATTTGGCGG CCGTAAAGGT GTTGTTGATC TATATGGTTA TGTTGATGTA
TTCAACTTAG GAAACGAAAG CTCTGGCGAC AAGACAGATA ACGCTAGCAA GATATTTATG
AAGTTTGCAC CACGTTTCTC TTTAGATGCC ATTACTGGTA AAGATTTATC TTTCGGCCCA
GTGCAAGAAG TTTACTTCTC TACACTGTAT AACTGGGGTG GCGGTGGTAT CACTGGTGTT
CGTCAGAATG ATGATCCTAC TAAAGATCCT GTAGCTATTG CTGGTGATGT TAACATGTCT
TTCTGGGGTG TCGGTGCTGA TGTTATGGTG CCATGGTTAG GTAAGACTGG CATGAACTTA
TATGCAACTT ACGACCTTAA CACTAAAGAC TGGAATGGCT ACCAGTTCTC TGCTAACTGG
TTCAAACCTT TCTACTTCTT TGATAACAAG AGCTTTCTGT CATTTCAAGG CTATGTTGAT
TGGCAGTTTG CAATGGATGA AGATGTAAGT GGCTTGAATG ATTTTGGCCG TACAAACAAG
TCTTCAGAAG GTGGTAATGC ATTCTTTGGT TTATATTGGC ATTCAGACAA CTATGCAGTT
GGTTATGGCG CTAAGTACTA TAACAAAGTA TATGGTCTAA ATAACCAAGC ATTCGCGACT
GAAAACTGGG GTGGTTTGGA TAGCACTGGT TGGGGTCATT ACTTCACAGC TACTTACAAG
TTCTAA
|
|---|
| Protein sequence | MKNVKTLALA ATAVAAISGN AFAADRSDIY ATDYKWMQFN AMYSVDEHPI ADGADAHHNY
LEMEFGGRKG VVDLYGYVDV FNLGNESSGD KTDNASKIFM KFAPRFSLDA ITGKDLSFGP
VQEVYFSTLY NWGGGGITGV RQNDDPTKDP VAIAGDVNMS FWGVGADVMV PWLGKTGMNL
YATYDLNTKD WNGYQFSANW FKPFYFFDNK SFLSFQGYVD WQFAMDEDVS GLNDFGRTNK
SSEGGNAFFG LYWHSDNYAV GYGAKYYNKV YGLNNQAFAT ENWGGLDSTG WGHYFTATYK
F
|
|---|
| |