Gene Sbal_3161 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal_3161 
SymbolnrdR 
ID4845415 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS155 
KingdomBacteria 
Replicon accessionNC_009052 
Strand- 
Start bp3700047 
End bp3700496 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content49% 
IMG OID640120420 
Producttranscriptional regulator NrdR 
Protein accessionYP_001051511 
Protein GI126175362 
COG category[K] Transcription 
COG ID[COG1327] Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains 
TIGRFAM ID[TIGR00244] transcriptional regulator NrdR 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.769122 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATTGTC CATTTTGCAG CGCGACAGAT ACTAAAGTCA TCGATTCTCG ATTAGTGGCG 
GAAGGCCATC AAGTGCGCCG TCGCCGAGAA TGTACCGAAT GCCATGAAAG ATTTACCACC 
TTCGAAGGCG CCGAGTTAGT CATGCCTAGG GTGATTAAAC GTGATGGTTC ACGCCAACCC 
TTCGATGAAG AAAAACTCCA AGGTGGCATG CTGCGCGCGG TTGAAAAACG CCCCGTGTCT 
ATGGATGAAA TCGAGCAAGC GCTTAGCAAA ATCAAATCTA CCCTACGCGC CACTGGCGAG 
CGGGAAGTGC CCTCAGAAAT GGTCGGTAAC TTGATGATGG AGCAATTGAT GAGTCTCGAT 
AAAGTCGCCT ACATACGTTT TGCTTCTGTG TACCGCGCCT TTGAAGATGT GTCTGAATTT 
GGTGAAGCCA TCGCTAAACT GCAAAAGTAG
 
Protein sequence
MHCPFCSATD TKVIDSRLVA EGHQVRRRRE CTECHERFTT FEGAELVMPR VIKRDGSRQP 
FDEEKLQGGM LRAVEKRPVS MDEIEQALSK IKSTLRATGE REVPSEMVGN LMMEQLMSLD 
KVAYIRFASV YRAFEDVSEF GEAIAKLQK