| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal_3119 |
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| Symbol | |
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| ID | 4845710 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS155 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009052 |
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| Strand | - |
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| Start bp | 3654982 |
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| End bp | 3655962 |
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| Gene Length | 981 bp |
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| Protein Length | 326 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640120378 |
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| Product | RpoD family RNA polymerase sigma factor |
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| Protein accession | YP_001051469 |
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| Protein GI | 126175320 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02394] RNA polymerase sigma factor RpoS
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGCCGCA TAAAAAGCAC TGCCGCAGAA GCACTAGTAG ATTTATCCGT AGACACTGTT
GACTTCGATC TTGAAAAAGA AGAAGTTGCA TCCGATTTAG TTCAAGAGCT AGGAATAGAA
CAACAGGTTC AAGATGACCT GCAAAAAAAT CTTGATGCCA CTCAACTTTA CCTTGGTGAG
ATTGGTTTTT CCCCACTGCT TAGCGCAGAA GAAGAAGTTT ACTTTTCCCG TAAAGCCTTA
AAAGGCTGTG CAAAATCCCG TAATCGCATG ATCGAAAGTA ATTTACGTCT GGTCGTAAAG
ATTGCCCGTC GTTACAACAA TCGCGGCTTA GCACTGCTTG ATCTTATCGA AGAAGGCAAC
TTAGGCTTAA TTCGTGCTGT TGAAAAGTTT GATCCAGAAA GAGGTTTCCG TTTTTCAACC
TATGCGACTT GGTGGATCAG ACAGACCATT GAGCGCGCCA TTATGAATCA GACTCGTACA
ATTCGTTTGC CTATTCATGT CGTTAAAGAA CTCAACGTTT ACTTGCGCAC CGCTCGCGAG
TTAGCACAAA AACTCGATCA CGAACCAACG GCCGAAGAAA TTGCCGAAAA ACTACAAGTG
TCGAGTGCAG ATGTCAGTCG TATGCTTAAG CTGAATGAGA AAATCACCTC TGTCGATACG
CCTTTGTGGG GCGATAATGA CAAGGCGCTG CTGGATATTT TAGCCGATGA CGATAACGTT
GGCCCTGACT ATAAAGTGCA AGATGAAGAT ATTTCTAATT CAGTGGTCAA ATGGCTCAAT
GAGTTAAACA CTAAACAAAG AGAAGTGTTA GCCCGCCGTT TTGGTCTGTT AGGTTATGAA
CCTTCTACAC TCGAAGATGT GGGTGCTGAA ATTGGTTTGA CCCGTGAACG TGTACGTCAA
ATCCAAGTGG AAGCATTGAA ACGTTTACGC GACTTATTAG GATCTCAAGG TTTATCTGTT
GAAGCATTGT TTAGAAATTA A
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| Protein sequence | MSRIKSTAAE ALVDLSVDTV DFDLEKEEVA SDLVQELGIE QQVQDDLQKN LDATQLYLGE
IGFSPLLSAE EEVYFSRKAL KGCAKSRNRM IESNLRLVVK IARRYNNRGL ALLDLIEEGN
LGLIRAVEKF DPERGFRFST YATWWIRQTI ERAIMNQTRT IRLPIHVVKE LNVYLRTARE
LAQKLDHEPT AEEIAEKLQV SSADVSRMLK LNEKITSVDT PLWGDNDKAL LDILADDDNV
GPDYKVQDED ISNSVVKWLN ELNTKQREVL ARRFGLLGYE PSTLEDVGAE IGLTRERVRQ
IQVEALKRLR DLLGSQGLSV EALFRN
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