Gene Sbal_3111 details

Gene Information

• Locus tag: Sbal_3111
• ID: 4841948
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella baltica OS155
• Kingdom: Bacteria
• Replicon accession: NC_009052
• Strand: +
• Start bp: 3640114
• End bp: 3640638
• Gene Length: 525 bp
• Protein Length: 174 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 640120362
• Product: DNA polymerase III chi subunit HolC
• Protein accession: YP_001051461
• Protein GI: 126175312
• COG category: [L] Replication, recombination and repair
• COG ID: [COG2927] DNA polymerase III, chi subunit

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.00130972
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGCAAG GCATTGAAAT CATGACTCAA GTGCTGTTTT ATCTCATGCC GCCAGTGGCA 
TTAACTGCCA AGGCCAAGGC TGATTCACCT GTTGCAACCG CGAATGCGAA CCCTGCGCTT 
TGCGAGATGT ATCTTCTGGC ATGCCAACTG GCGCAGCAGG CTTTTGTGAA ACAACAATGG 
GTCTATATCC ATTGCCAAGA TAAGCAGCAA GCCCATGCGA TTGATGAACT TTTATGGCAG 
TTTGAGCCAA GTGCCTTTGT ACCTCATAAC CTTAAAGGTG AAGGCCCGAT GACGGGATCG 
CCGGTAGAAA TTGGTTTTGA TCGCCTCGGC GCCAACAAAA GTCGCCAAGT TCTGATTAAT 
CTTGCAGACC AAGCGCCCCC ATTTGCGGTA AACTTTGGCC ACATTATCGA TTTTGTTGCC 
AATGACGATC AGCATAAAGC GGTCGCTCGC GAACGTTATC GACAGTATCG CGGCTTAGGG 
GTCAATTTAC AGACCCAAGA CTTAGCAACA CATCCACTTA ATTAG 

 

Protein sequence

MKQGIEIMTQ VLFYLMPPVA LTAKAKADSP VATANANPAL CEMYLLACQL AQQAFVKQQW 
VYIHCQDKQQ AHAIDELLWQ FEPSAFVPHN LKGEGPMTGS PVEIGFDRLG ANKSRQVLIN 
LADQAPPFAV NFGHIIDFVA NDDQHKAVAR ERYRQYRGLG VNLQTQDLAT HPLN