| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal_3081 |
|---|
| Symbol | |
|---|
| ID | 4844999 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS155 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009052 |
|---|
| Strand | - |
|---|
| Start bp | 3601476 |
|---|
| End bp | 3602831 |
|---|
| Gene Length | 1356 bp |
|---|
| Protein Length | 451 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 640120332 |
|---|
| Product | short chain fatty acid transporter |
|---|
| Protein accession | YP_001051431 |
|---|
| Protein GI | 126175282 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG2031] Short chain fatty acids transporter |
|---|
| TIGRFAM ID | [TIGR00366] conserved hypothetical integral membrane protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.45839 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTAAACA AAGCGGCAAA ACCTTTGGTC AAACTCGTCG ACCGATATCT ACCCGATCCC
TATATTTTCG TCCTTTTACT CACCTTAGTG GTGTTAATTG CAGCTGTGGT CGCAGAACAC
AAAACTCCGC TGGAAGTCAT CAACTATTGG GGCGATGGCT TTTGGACCTT GCTGAGTTTT
TCGATGCAGA TGCTGTTAGT GCTGGTGGCG GGATTCATGC TGGCAAGCTC GCCGCCGATT
AAAAAGCTGC TCGATGCGAT TGCAGGATGC GCTAAATCGG CACCGCAAGC CATTATTTTA
GTAACCTTGG TCTCACTGGC CGCCAGTTGG GTTAACTGGG GATTCGGGCT AGTGGTGGGC
GCGTTATTTG CCAAAGCCTT AGCGCGTAAA GTGAAAGTGG ATTATCGGCT GCTGGTCGCC
AGCGCCTATT CTGGCTTTGT GGTTTGGCAT GGTGGGCTTG CGGGTTCTAT CCCATTAACC
ATAGCAACGG CGGGGCATTT CTCCGAAGCA CAAATTGGCA TTATCCCCAC CAGTGAAACC
ATTTTCGCGA GCTTTAACTT ATTGTTAGTG GCGATTCTGT TTGTGGTCAT GCCCTTAGTG
AATCGCTTTA TGTTGCCTGA AGACAAGGAC TGCATTTATG TCGACCCAAG TGCCCTTGAC
GACAAAGGCA GCGAACCCGC AGCTTCGGCG CTGGAGTTTA CCCCTGCCAA TGTGAGTGAG
CGTCAGCTTG AAAACCGTCC TGCGGATAAG TTAGAAAATA GCCGCTTACT CGGCTGGAGC
GTGGGTGGCG CAGGGCTTGT GTACTTAGGC TATTACTTTT GGGTACAGGG CGGCAGCTTA
AACCTTAACT TAGTGAACTT CTTATTCTTG TTCCTCGCCA TCCTCTTACA CCAAACGCCA
CGCAGTTTAT TAACCAGCTT GAATGAGGCC ATTAAGGGCG GCGCAGGGAT TGTGATCCAA
TTCCCTTTCT ATGCGGGCAT TATGGCGGTG ATGGTGCAGT CGGGTTTAGC CCAAAGTATT
TCGGAAGGTT TTGTGGCCAT AGCCAGTGCC GAGAGCCTGC CATTTTGGAG CTTTATTAGC
GCGGGAATTG TAAATATTTT TGTGCCATCG GGAGGCGGTC AATGGGCCGT GCAGGCGCCG
ATTATGTTAC CCGCTGCCGA AGCCTTGGGT GCCGATGTTG CTCGGGTGGC TATGGCCGTA
GCTTGGGGTG ATGCCTGGAC TAACCTAATT CAACCTTTCT GGGCACTGCC CGTGCTGGCA
ATTGCGGGCT TAAAAGCACG GGATATTATG GGTTTTTGTT TAATGCAGCT GATGATCACA
GGCGTGATTA TCAGTATCGC GTTGAGCTGG TTTTAA
|
|---|
| Protein sequence | MLNKAAKPLV KLVDRYLPDP YIFVLLLTLV VLIAAVVAEH KTPLEVINYW GDGFWTLLSF
SMQMLLVLVA GFMLASSPPI KKLLDAIAGC AKSAPQAIIL VTLVSLAASW VNWGFGLVVG
ALFAKALARK VKVDYRLLVA SAYSGFVVWH GGLAGSIPLT IATAGHFSEA QIGIIPTSET
IFASFNLLLV AILFVVMPLV NRFMLPEDKD CIYVDPSALD DKGSEPAASA LEFTPANVSE
RQLENRPADK LENSRLLGWS VGGAGLVYLG YYFWVQGGSL NLNLVNFLFL FLAILLHQTP
RSLLTSLNEA IKGGAGIVIQ FPFYAGIMAV MVQSGLAQSI SEGFVAIASA ESLPFWSFIS
AGIVNIFVPS GGGQWAVQAP IMLPAAEALG ADVARVAMAV AWGDAWTNLI QPFWALPVLA
IAGLKARDIM GFCLMQLMIT GVIISIALSW F
|
|---|
| |