Gene Sbal_2914 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal_2914 
SymbolfliR 
ID4842143 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS155 
KingdomBacteria 
Replicon accessionNC_009052 
Strand
Start bp3429720 
End bp3430517 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content46% 
IMG OID640120161 
Productflagellar biosynthesis protein FliR 
Protein accessionYP_001051265 
Protein GI126175116 
COG category[U] Intracellular trafficking, secretion, and vesicular transport
[N] Cell motility 
COG ID[COG1684] Flagellar biosynthesis pathway, component FliR 
TIGRFAM ID[TIGR01400] flagellar biosynthetic protein FliR 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.401935 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGCTGC TGCTCGATAC CTTAATGCAG ACCATTGCCG CTTATATGTG GCCGCTGTTT 
CGGGTCGCGA GTATGTTGAT GGTTATGGTG GTATTTGGGG CGGCAACTAC CCCAAGCCGC
GTACGCTTAT TATTGGCTAT GGCGATTACC TTTGCGATAG CGCCAGTCCT TCCTCCCGTT
CAAAATGCCG ATTTATTTTC ACTCAGCGCA GTATTTATCA CCGCGCAGCA AATTATTATT
GGTGTTGCCA TGGGGTTTGT GACTCAAATG GTGATGCAAG TTTTTGTATT AACTGGGCAG
ATTATTGGTA TGCAAACCAG CCTCGGTTTT GCCTCTATGG TTGATCCAGG TTCAGGTCAG
CAAACGCCGG TTATTGGTAA CTTTTTTCTA TTATTGGCGA CATTGATCTT CTTAGCCGTA
GATGGCCATC TGTTGATGAT CCGTATGTTG GTGGCGAGCT TTGAGACCCT ACCCATTTCT
AATCAAGGAT TAACACTCAC TAGCTACCGT GCTTTAGCAG ATTGGGGCTC GTATATGTTT
GGTGCTGCAT TAACTATGTC GATATCCGCG ATTATCGCCT TGTTGTTAGT CAATTTGTCC
TTCGGGGTGA TGACCCGCGC CGCGCCGCAG TTAAACATTT TCTCTATTGG TTTTCCGATC
ACTATGATTG GCGGGCTGTT TATTCTTTGG TTAACCTTAA CACCAGTCAT GGAGCATTTT
GATGAAGTAT GGGCCGCGGC TCAAGTGCTG CTTTGCGATA TGTTAGCGCT TCAATGTAAC
GCAGATGGCT TGATATGA
 
Protein sequence
MELLLDTLMQ TIAAYMWPLF RVASMLMVMV VFGAATTPSR VRLLLAMAIT FAIAPVLPPV 
QNADLFSLSA VFITAQQIII GVAMGFVTQM VMQVFVLTGQ IIGMQTSLGF ASMVDPGSGQ
QTPVIGNFFL LLATLIFLAV DGHLLMIRML VASFETLPIS NQGLTLTSYR ALADWGSYMF
GAALTMSISA IIALLLVNLS FGVMTRAAPQ LNIFSIGFPI TMIGGLFILW LTLTPVMEHF
DEVWAAAQVL LCDMLALQCN ADGLI