Gene Sbal_2887 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal_2887 
Symbol 
ID4843437 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS155 
KingdomBacteria 
Replicon accessionNC_009052 
Strand- 
Start bp3399165 
End bp3399728 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content36% 
IMG OID640120135 
ProductdTDP-4-dehydrorhamnose 3,5-epimerase 
Protein accessionYP_001051239 
Protein GI126175090 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1898] dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes 
TIGRFAM ID[TIGR01221] dTDP-4-dehydrorhamnose 3,5-epimerase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.301522 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCTCG AGAGAAAAAT GAACATCATC GACACCAAGA TTCCTGAAGT AAAAATAATT 
GAGCCGGCTG TTTATGGCGA TGAGCGAGGT TTCTTTATGG AAACCTGGAA TCAACAAAAG 
TTTGAAGAAC TTGTGACTGG TAAATTAACA AGATTTGTTC AAGATAATCA CTCTAAATCT 
AAGAAAGGAA TCTTGCGAGG GTTACATTAT CAAACTGAAA ATACGCAGGG CAAATTAGTT 
CGTGTTGTTT CTGGTGAAGT ATTCGATGTA GCTGTTGATA TTCGTAAAGA CTCACCTAGT 
TATGGCTATT GGGTTGGTGA ATATTTATCT GCCGAAAATA AACGTCAGTT ATGGGTACCA 
GAAGGATTTG CTCATGGTTT CTATGTAACA AGCGAAGAAG CTGAATTTGT TTATAAATGT 
ACTAATTATT ATAATCCAAA CTCAGAAGTA TCGATTTTGT GGAGTGATAA ATCTTTAGAT 
ATTAAATGGC CAATCCAGTC TTCTCCCGAA TTGTCAAAAA AAGACCAACA AGGTGTTCTG 
CTTCAGCTTG CACCCATGTT GTGA
 
Protein sequence
MNLERKMNII DTKIPEVKII EPAVYGDERG FFMETWNQQK FEELVTGKLT RFVQDNHSKS 
KKGILRGLHY QTENTQGKLV RVVSGEVFDV AVDIRKDSPS YGYWVGEYLS AENKRQLWVP 
EGFAHGFYVT SEEAEFVYKC TNYYNPNSEV SILWSDKSLD IKWPIQSSPE LSKKDQQGVL 
LQLAPML