| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal_2876 |
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| Symbol | |
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| ID | 4843426 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS155 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009052 |
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| Strand | - |
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| Start bp | 3387765 |
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| End bp | 3389705 |
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| Gene Length | 1941 bp |
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| Protein Length | 646 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640120124 |
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| Product | polysaccharide biosynthesis protein CapD |
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| Protein accession | YP_001051228 |
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| Protein GI | 126175079 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1086] Predicted nucleoside-diphosphate sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAATTTT TGCAGTGTTT ATTTTCTTTA AAGCGGGCAC AGAAGCGTCT AGTGAGTGTC
GCGATTGATT CGGTATTTCT CTTAGTCGCA TTTTGGGCTG CTTTGTTGGT ACGTTTGGAT
GCCGTAAGCG TATTTACTAA TAGCGTATAC TGGTTGCTCA TTGTTTTGGT TGTGCCTGTG
AGTATCATGG TGTTTGCTAA GCTGGGATTG TATCGTGCTG TGCTTAGATA TATGGGATTG
CAGGCGCTAA CTGCGATTAT TGTTGGGGTT CTTGCATCAA CAGTGTCGTT AGTGTTAATT
GCGTATTACA GTGAGGCGAA TTTACCCCGT ACGGTACCAA TTATTTACGC AGCTTTTGCC
TTGGTATTTG TCGGTGGAAC TCGCGCTATG GTGCGCTCGT TAGTAGGGTC TGGTCTAAAG
CGGGTTGGCG AACCTGTGAT TATTTATGGG GCAGGGGTCA GCGGACGGCA GTTAGTGACC
TCATTGGTCC AGAGTCATGA ATATTATCCT TTTGCATTTG TTGATGATGA TGTGACTTTA
CATGGCACTG TCATCCAAGG AGTGCATGTT CATTCGCCTT CTATTATTAA AAAACTCATC
ACACAAAAAG CAGCTACTAA AGTGTTGCTG GCTATGCCAA GTGCTTCTCG CTCTCGTCGC
CAAGAGATTT TAGTTAAGCT CGAACCTTTG GCTGTACAAG TTTTAACCTT ACCTGCAATG
GCTGATCTGG TAAGTGGTAA TAAGCTTTAT AGCGATATTA AAGAAGTCGA AATCGATGAT
TTGTTAGGAC GTGATGCAGT TACTCCCCGT TGCGACTTAA TGGTCGCCAA TATCCGCAAC
AAAGTAGTGA TGGTCACGGG AGCTGGCGGC TCGATTGGTT CTGAGTTATG TCGACAGATA
TTAAAACAAT CACCTAAAAA ATTAGTGTTA TTTGAATTAT CTGAGTTTGC CTTGTATACG
ATTGATCGTG AACTTTCTGC GACAGCTTTT GAGTTAGGGC TTGATGTTAA GATTTTACCA
ATTATGGGTT CGGTACAACG GGAAAATCGT GTTCAAGCAG TAATGCAATC TTTTAGAGTG
CAAACTGTGT ATCACGCTGC AGCTTATAAG CATGTGCCAT TGGTGGAGCA CAATGTCGTT
GAAGGTGTGC GTAATAATAT ATTTGGTACT TTATATACTG CACGCGCAGC TATTGCAGCT
AAGGTTGAAA CTTTTGTATT GATTTCGACG GATAAAGCTG TACGACCTAC TAATATCATG
GGCACTACTA AGCGTATGGC CGAGTTGGCA CTTCAAGCGT TATCTAAAGA AACACATCAA
ACCCGTTTTA GCATGGTTCG CTTTGGTAAT GTTTTGGGCT CTTCAGGTTC TGTAGTGCCA
TTATTCCGAA AGCAAATTGC TAATGGCGGC CCTGTTACTG TTACGCATCG TGACATAACT
CGTTTCTTTA TGACCATTCC TGAGGCTTCA CAGTTGGTTA TCCAAGCGGG GGCAATGGGC
AAAGGTGGCG ATGTGTTCGT GCTTGACATG GGTAAAGCAG TTAAAATTGT TGATTTAGCT
GCAAAAATGA TTCGCCTTAG CGGTTTTGAA GTAAAGGATG AACTCAATCC CGATGGTGAT
ATTGCCATCG AGTTTAGTGG CTTACGTCCT GGTGAAAAAT TATACGAAGA ATTACTGATT
GGTGATGATG TTACTGGCAC CGAACATGAG CGTATTATGA CAGCCAACGA AATTTTTCTT
TCTTGGAAAG AGTTAGAATG TATTCTTAAT CGCTTAGATA AAGCTTGTCA TGAGTTTAAT
CATGAAGCTA TACGAGAAAT CTTACTGTCT GCACCAACAG GTTTTAATCC AACAGACGGG
ATATGCGATT TAGTGTGGCA ACAAAAGAAA AAATTAAGCG CTGTTGATGG CCAAAATAAA
GTTGTTCCAT TAGTTTCTTA G
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| Protein sequence | MEFLQCLFSL KRAQKRLVSV AIDSVFLLVA FWAALLVRLD AVSVFTNSVY WLLIVLVVPV
SIMVFAKLGL YRAVLRYMGL QALTAIIVGV LASTVSLVLI AYYSEANLPR TVPIIYAAFA
LVFVGGTRAM VRSLVGSGLK RVGEPVIIYG AGVSGRQLVT SLVQSHEYYP FAFVDDDVTL
HGTVIQGVHV HSPSIIKKLI TQKAATKVLL AMPSASRSRR QEILVKLEPL AVQVLTLPAM
ADLVSGNKLY SDIKEVEIDD LLGRDAVTPR CDLMVANIRN KVVMVTGAGG SIGSELCRQI
LKQSPKKLVL FELSEFALYT IDRELSATAF ELGLDVKILP IMGSVQRENR VQAVMQSFRV
QTVYHAAAYK HVPLVEHNVV EGVRNNIFGT LYTARAAIAA KVETFVLIST DKAVRPTNIM
GTTKRMAELA LQALSKETHQ TRFSMVRFGN VLGSSGSVVP LFRKQIANGG PVTVTHRDIT
RFFMTIPEAS QLVIQAGAMG KGGDVFVLDM GKAVKIVDLA AKMIRLSGFE VKDELNPDGD
IAIEFSGLRP GEKLYEELLI GDDVTGTEHE RIMTANEIFL SWKELECILN RLDKACHEFN
HEAIREILLS APTGFNPTDG ICDLVWQQKK KLSAVDGQNK VVPLVS
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