Gene Sbal_2787 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal_2787 
Symboltgt 
ID4842502 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS155 
KingdomBacteria 
Replicon accessionNC_009052 
Strand
Start bp3275918 
End bp3277042 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content46% 
IMG OID640120023 
Productqueuine tRNA-ribosyltransferase 
Protein accessionYP_001051143 
Protein GI126174994 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0343] Queuine/archaeosine tRNA-ribosyltransferase 
TIGRFAM ID[TIGR00430] tRNA-guanine transglycosylase, queuosine-34-forming
[TIGR00449] tRNA-guanine transglycosylases, various specificities 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value1.35544e-07 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATTTG AATTAGATAC TACCGACGGC CGTGCGCGCC GTGGTCGGTT GATTTTTGAC 
CGTGGCACAG TAGAAACCCC AGCATTTATG CCTGTGGGAA CCTACGGCAC AGTTAAAGGT
ATGACGCCAG AAGAAGTACG TGCCACAGGC GCAGACATTC TGCTCGGTAA CACTTTCCAT
TTATGGTTGC GCCCAGGCGA AGAAATCATG CGTAAGCACG GTGACTTGCA TGATTTTATG
AACTGGCAGC GTCCTATTTT AACTGACTCG GGTGGTTTCC AAGTATTCAG TCTTGGCGAT
ATTCGTAAGA TCACCGAAGA AGGTGTGCAT TTCCGTTCGC CAATCAATGG CGAGAAAATC
TTCTTAGATC CTGAAAAATC AATGCAAATT CAAGATGCAT TGGGCAGTGA TGTAGTGATG
ATTTTTGACG AATGTACGCC ATATCCCGCA ACCGAAGACG AAGCACGTAA GTCAATGCAG
ATGTCTCTGC GTTGGGCGAG ACGTTCACGT GATGAATTTG ACCGTCTAGA GAACCCTAAC
TCTCTGTTCG GTATTATTCA GGGCGGTGTG TATGAAGATT TACGCGACGA AAGCTTAAAA
GGCTTAGTCG ATATAGGTTT CGACGGTTAT GCCGTCGGTG GTTTGGCCGT AGGTGAGCCT
AAAGCAGATA TGCATCGCAT TCTTGAGCAT ATTTGCCCGC AAATTCCTGC AGACAAGCCT
CGCTATCTGA TGGGGGTCGG TAAACCAGAA GATTTAGTTG AAGGTGTACG TCGCGGTGTT
GACATGTTTG ACTGTGTAAT GCCAACCCGT AATGCCCGCA ACGGTCATCT GTTTACGAGT
GAAGGTGTAA TCAAAATACG CAATGCGCGT CATAGAGATG ACACGTCACC ACTTGATACT
AAGTGTGATT GTTATACCTG TAAAAATTAT TCACGGGCGT ACCTTTACCA CTTAGATCGT
TGTAATGAGA TTCTGGGTGC GCGTTTAAAC ACCATTCACA ACTTGAGATA CTATCAAATG
TTAATGGAAG GTTTGCGCGG TGCGATTGAG ACGGGTACAT TAGACGCCTT TGTGGCGGAC
TTCTATACCA GTCAAGGTCG CGAAGTACCA GAGTTAGTCG ATTGA
 
Protein sequence
MKFELDTTDG RARRGRLIFD RGTVETPAFM PVGTYGTVKG MTPEEVRATG ADILLGNTFH 
LWLRPGEEIM RKHGDLHDFM NWQRPILTDS GGFQVFSLGD IRKITEEGVH FRSPINGEKI
FLDPEKSMQI QDALGSDVVM IFDECTPYPA TEDEARKSMQ MSLRWARRSR DEFDRLENPN
SLFGIIQGGV YEDLRDESLK GLVDIGFDGY AVGGLAVGEP KADMHRILEH ICPQIPADKP
RYLMGVGKPE DLVEGVRRGV DMFDCVMPTR NARNGHLFTS EGVIKIRNAR HRDDTSPLDT
KCDCYTCKNY SRAYLYHLDR CNEILGARLN TIHNLRYYQM LMEGLRGAIE TGTLDAFVAD
FYTSQGREVP ELVD