| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal_2760 |
|---|
| Symbol | fadJ |
|---|
| ID | 4844854 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS155 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009052 |
|---|
| Strand | - |
|---|
| Start bp | 3243361 |
|---|
| End bp | 3245481 |
|---|
| Gene Length | 2121 bp |
|---|
| Protein Length | 706 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640119996 |
|---|
| Product | multifunctional fatty acid oxidation complex subunit alpha |
|---|
| Protein accession | YP_001051116 |
|---|
| Protein GI | 126174967 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase
[COG1250] 3-hydroxyacyl-CoA dehydrogenase |
|---|
| TIGRFAM ID | [TIGR02440] fatty oxidation complex, alpha subunit FadJ |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAAGA CCTTTAATTT AACCCGCCGC GACGACGGCA TTGCCATCCT GACTATGGAT
GTTCCTGGCG AAACCATGAA CACCCTAAAA GCGCAGTTTG GCCCTGAAAT CAGTGAGATT
CTGGCCGATA TCAAAAGTGA TTCGAGCATT CGCGGTTTAG TGCTGATCTC AGGCAAAAAA
GATTCTTTCG TCGCGGGCGC AGATATTTCT ATGCTCGATG CCTGTAAAAC GGCGGGCGAT
GCCAAAGCCT TATCCCAGCA AGGCCACGTG GTTTTCAATG AGCTAGAAGC CTTAACGATT
CCTGTAGTTG CCGCAATCCA TGGTGCCTGT TTAGGCGGTG GTTTAGAGTT AGCCTTAGCT
TGTCATCAAA GGGTATGTAG CGACGATGGC AAGACTATGC TCGGCGTACC GGAAGTTCAA
CTTGGCTTAT TGCCAGGCGG CGGCGGGACT CAACGTTTGC CACGTTTAGT CGGCATTACC
ACCGCCTTAG ATATGATGTT GACCGGTAAA CAAATTCGTC CTAAACAAGC CTTGAAAATG
GGCTTAGTGA ATGATGTTGT GCCGCAGACG ATTCTGTTAC AAACCGCAGT TGAGATGGCG
CTTGCGGGTA AACGTGCACC GAAACCAGTT AAGAAGTCAC TCGTTAATCA AGTGCTTGAA
GGCACGAGTT TCGGCCGTAA CATTATTTTC GATCAAGCGA CTAAGCAGGT CGAAAAGAAA
ACCCAAGGTA ATTATCCTGC GCCTGCCAAG ATCATTGACT GCGTGCGTCA AGGAATTACT
AAGGGCATGC AAAAGGGTTT AGAAGTCGAA GCCAGTCATT TTGCCGAATT AGTGGTATCG
AAAGAGTCTG AAGCGCTGCG CAGTATTTTC TTCGCGACCA CAGAAATGAA GAAAGAAACT
GGCGCTGAAG GTGCAAGCCC GCGTAAAGTG AAAAAAGCGG TGATCTTAGG TGGCGGTTTA
ATGGGCGGTG GTATCGCATC TGTGACGACG ACCAAGGCCA AAATCCCCGT TCGTGTCAAA
GACATCAGCG AAAAAGGTTT AAGCAATGCA TTAGCTTACG CCTACAAGCT GTTGGATAAA
GGGGTTAAGC GCCGTCATAT GACGCCTGCT GCCCGTGACA ACTTAATGGC ACTGATGACC
ACAACGACTG AATATAAAGG CGTTAAAGAT GCCGACATCG TTGTGGAGGC GGTATTTGAA
GATTTAGCGC TTAAGCATCA AATGGTGAAA GACATTGAGC GTGAGTGTGG TGAGCACACC
ATTTTTGCGT CAAACACCTC ATCTTTGCCT ATTAGCCAAA TCGCCGAAGC GGCAACGCGT
CCTGAGAACG TGATTGGTCT GCATTATTTC TCGCCAGTAG AAAAAATGCC GCTGGTGGAA
GTGATTGCCC ATGCTAAAAC GTCACCAGAA ACCATTGCGA CTACTGTCGC ATTTGCCCGT
AAGCAAGGTA AAACACCGAT AGTGGTGCAA GACGGCGCGG GTTTCTACGT GAACCGTATT
CTTGCGCTCT ACATGAACGA GGCCGCGCAA TTATTACTTG AAGGCCAAAG TGTTGAACAT
CTTGATAAAG CGCTGGTTAA GTTTGGTTTC CCTGTGGGCC CTATTACTTT ACTCGACGAA
GTGGGTATCG ACGTGGGCGC TAAGATTTCA CCAATCCTCG AAAAAGAATT GGGTGAACGT
TTTAAAGCGC CAGCGGCTTT TGACAAGCTT TTGGGTGACG ATCGTAAAGG CCGTAAAAAT
GGTAAAGGTT TCTATCAATA CGGCGCATCG AGTAAGAAAG CTAAAGCTGT CGATGAGAGT
GTTTATGGCG TGTTAGGTAT TAAGCCAGGC ACCAATAAAG ACGCAAAAGC ACTTGCCGAG
CGTTGTGTCG TACAAATGCT CAACGAAGCG GTGCGTTGTT TAGATGATGG TATTATCGCA
TCGCCAAGAG ATGGTGATAT TGGCGCCATT TTCGGTATTG GCTTCCCGCC ATTCCTCGGT
GGTCCATTCC ATTATATTGA CACTTTGGGT GCTGCGAACT TAGTGCGAAT TCTTGAAGGT
TATCAAAGCC AATTGGGTAG CAGATTCGAA CCTTGTGAGC GCTTAAAAAC CATGGCTCAA
GAAAACGCGC ACTTTTTCTA A
|
|---|
| Protein sequence | MEKTFNLTRR DDGIAILTMD VPGETMNTLK AQFGPEISEI LADIKSDSSI RGLVLISGKK
DSFVAGADIS MLDACKTAGD AKALSQQGHV VFNELEALTI PVVAAIHGAC LGGGLELALA
CHQRVCSDDG KTMLGVPEVQ LGLLPGGGGT QRLPRLVGIT TALDMMLTGK QIRPKQALKM
GLVNDVVPQT ILLQTAVEMA LAGKRAPKPV KKSLVNQVLE GTSFGRNIIF DQATKQVEKK
TQGNYPAPAK IIDCVRQGIT KGMQKGLEVE ASHFAELVVS KESEALRSIF FATTEMKKET
GAEGASPRKV KKAVILGGGL MGGGIASVTT TKAKIPVRVK DISEKGLSNA LAYAYKLLDK
GVKRRHMTPA ARDNLMALMT TTTEYKGVKD ADIVVEAVFE DLALKHQMVK DIERECGEHT
IFASNTSSLP ISQIAEAATR PENVIGLHYF SPVEKMPLVE VIAHAKTSPE TIATTVAFAR
KQGKTPIVVQ DGAGFYVNRI LALYMNEAAQ LLLEGQSVEH LDKALVKFGF PVGPITLLDE
VGIDVGAKIS PILEKELGER FKAPAAFDKL LGDDRKGRKN GKGFYQYGAS SKKAKAVDES
VYGVLGIKPG TNKDAKALAE RCVVQMLNEA VRCLDDGIIA SPRDGDIGAI FGIGFPPFLG
GPFHYIDTLG AANLVRILEG YQSQLGSRFE PCERLKTMAQ ENAHFF
|
|---|
| |