| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal_2757 |
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| Symbol | |
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| ID | 4844851 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS155 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009052 |
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| Strand | + |
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| Start bp | 3237627 |
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| End bp | 3241886 |
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| Gene Length | 4260 bp |
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| Protein Length | 1419 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 640119993 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) |
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| Protein accession | YP_001051113 |
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| Protein GI | 126174964 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTAAAG CACTCTTTAA AATCGTCTTG CTCGCTTTCT TTGGCTTGCA TGCATTCGAA
GACGTAAACG CATCTCCCTT TTCTGATAAA TCTCCAATTA TTCTCCAATC ACAATCTTTT
GGTGTCCCGC AAGGACTTTC CCAAAGCACA GTTACGTCTA TAGTCCAGGA CCATGATGGC
TATCTATGGA TTGGAACATT TAATGGACTT AATCGATTTG ATGGGAAAAA CTTTAAGCAT
TTTTATGCTA ATGATGCCAG AACAGGCCTT CCCAGTTCTT TTATCAGAAG TTTACTCATT
GATGAACAAG GCGTGTTATA TGTTGGAACC GATAGTGGTC TAGTCGTATA TGATAAACTG
CAAGAATCAT TTTCTCATTA TGGCCTATCG GTAAATGACT CCCCAGTCTG GAGCCTCAAC
TCAAGTGATA AGAGTTTAAT TGTTGGAACC AACAAAGCAA TTATTGATAT AAGTAACAAA
GAGCAAACTT ATGAACTTTC AAAGAAAGGC CTAAGTGAAA TTAAAAAAAC GATAAAAGTA
GGCGACGATT ATTATATAAG AGACTATGCA GGTACATTAT TTGAACTAAG CGGGAGTGAG
TTAAAAGAGA TAGCTCGAAA AACAATGGAT TTCGAGCAAA AGAATGACAC GACAATGCTA
ATATCATTCA GTGATGGATT ATATGAATAC GAAGGCAATG AAATAGTAAA AGTCGATAAT
CGAGCGTTTT CATTACTTAC AAAATACAAA AAAAACATAT ATGGCTTCAC AAATGAAAAT
GTTGTTGATA TTTCCAACAA CACTACTATT GGACTTTTAT CTCCAGATAG ACCTGACAAA
ACATCTTCAT TTTTTGCAAC CGAAGATATG TTTGTATTAG GAAGTATTGA TCAAGGCATC
ACTATTGTAA AAAAAGTAAA TAATTTAGTG CAAAAAACTA ACTTAACGAC AGATAGCACA
TGGCATCTTA CAAAAAACAC TAAAGGTTTT CTGGTTTCAT CTGACTCTGA AAAAATAAAA
CTTTTTGATG AAAATTTGAA CCTAATAAAA AGCTTCAACA CTCATACTCA AGGATACAAA
TACGCAGTTC TAAGTGACGA TGGGCTTTAT TTTGGTACTA ATACAGGGTT GTTTTTACAG
AAAGATGATT CATCCAAGTT GATTAGCAAA AATATAATAT CATCACTCTC TATTAATGAA
AATAGTTTGA CAATTGCTGC TGGCACACCT GATGGTAAAG TTTTAATCAT CAAAAATGGT
GAAATTACTA ACAGCATTGA TACAAAAAAG AATGAGCCAA TTTTTGACGT AGAGTTAAAA
TCTGACAACC TAATATATAT AGCTGGACAA GATGGACTAA AAAAATATGA AAATGGATTA
TTAGAAAACT TAAGCAATGA AATAACTTAC AGCATCGAAA AAAGTGATAA TGGCATTTAC
TTCGGAACAT CAACATCACT GATGCTTTAT AATGATACCA ATAAAAAAAT TTCGAGAATA
CTTTCTGACA ATAAAGAGAT CTACGCCATT GTAGATAATG ATGGTTTTAT AACAGCCTCA
TCACTAAGTG AAGTCATTAT TTTTGAAAAA AACAGTAAAG TATCTTATAT CTTAAAAACA
TCAAATGGGA GTCAATATGA GTACAACGCT CCCAATGGTA TCAATATAAA CGGTAACACT
CTACTTGCGG GGATTAGTGG GATTAGTCTA GTATCTCCTA AAGATGTTGT AAGTTATGTA
AAGAAAAGCA AGGTAAATAA AACAGAAATA TCAGATTTCT TAGTATTTAA TATAGTTCAA
AATCAAGAAA GTAACTATCT AGTACAATCA ATCGCAGCAT CTAATGAAAT ATCATTGAAA
TACTCTGACT ATCCATTTTC GTTCAACTTT ATATCTCCTA TGTCAGACGA CTCATCAACT
AACTACTACT ATAGAATGTT CGGTCTTTCT GATATATGGA TACCTGCAAA TGGAACAAAC
TCAGCAACAT ATACAAACCT ATCTCCAGGA AATTATACTT TTCAAGTTTA TTCTGTTAAT
TCACTTTCCG GTGAAAAAGC AGCAACAAAA GAGCTTACTG TCATTATAAC ACCTCCTTGG
TGGTCATCAT TTCAAGCAAA ATCTATTTAT GCTGCTATTG TATTATTTAT TTCCTACCTT
GTGACAAAAA CCATATTACG TCGTAGAGAA ACACAAAGAC AGATTGTACT CAGTGAAGAA
CGATTAAAAC TATCATTATG GGGAAGTGGT GATGAAATGT GGGACTGGGA TATTGAAACT
GGCAACATTT TCCGCTCAAA TATCTGGGGA GCACTTGAAT TCCCCCGTGA TGGACACCGT
TCTGGTAAAT CAGATGAAGA GAGCAATATA CATCCAATGG ATCAAGAGCG TGTTCGAGAA
GCGCTCAATA AGCATTTTTA TGGTGAAACA GATCATTTTG AAGCCGCATA CCGAGTAAAA
GGTAAAGACG ACAATTGGGT ATGGATCTTA GACCGCGCCA AAATTGTAGA ACGTGATGAA
AAAGATAATG CCCTGCGAAT GACTGGAACG ATTAAGAATA TTAGTCAATT TAAACAAAAA
GAAGAACAAC TAAAACTCTT TGAAAAGGCT ATTGAAAATA TTTCGGAAGG CATGTTTATC
CTCGACAGCG AATACCGTTT TGTCGAAGTT AATGAAGCTT GCTGTAAGAT TTCATTACGT
AACAGAACTG ATTTTATTGG TAACTTACTC ACATTTGATT TATATCCTGA AACCTTCTCC
ACCCAAATCA GGACCATGTT GAAACAACAA GGTCGCTGGG CAAATGAAGT AGAAGCAGCC
AGAGGAGATA AAAGTCACTT CCACATGGAG CTCACTATCG ATGCTATCTA TGATGAGTTA
GGCGAATTGT CACACTATGT CGGGGTTTTT TCGGATATTT CGAGACGAAA ACAGCAAGAA
GAAGAACTTA GAAAACTAAC CAATAATGAT CTTTTAACCG GACTACCTAA TCGCTCCAAC
TTACAAGTGA CCTTAAGTAA CTTAGTGAAT CGAGAAATAG CTCATGCGCT AATGGTGCTT
GACCTTGATA ATTTTAAGCG TATTAATGAT TCATTAGGTC ACCAGATTGG AGATACATTA
TTAAAGCTCG TTGCTGCCCG CATTAAGTCC TTACTTCCTA AAAATACCAG TATTTACCGT
CTAGGCGGAG ATGAATTCGC CATTGTATTA GATAAAAACT CAGATATAAG CGCCAGTGCT
GCCATCGCTA ACCGTATTAT CGAAGGGTTA AAACCCGCTT TTGAAGTGAG TAATGAGCAA
CTAGTCCTAG GATTAAGTAT TGGTATAGTG CTATTCCCAG AAGATGAGCA AAGCGAGCAA
GCATTACTGA GGAAAGCAGA TATTGCCATG TACCATGCTA AGTCAGCGGG AGGTAATTGC
TATCAGTTTT ATTCAGAGTC ATTAAATCAG CATGCGATTA GGCAGTTAGA AATAGAGAAT
CTTATCCGTG AAGGCTTAAA AGATGATCTA TTTGAAGTTT ATTATCAGCC TAAGGTTGAT
CTTAAGCGTG GTAAAATTGC AGGCATGGAG GCTTTGGTCA GATTAAATCA TCCAATACAT
GGTTTGATAC CCCCAAATGA TTTTATTCCA CTTGCTGAGG AAAACGGCTT AATTGTTGAA
ATTGGTGAAA TCGTCTTACG CAAAGCCTGT TTCGCAGCGC AGAAATGGCG TGAACAAGGA
ATATTCAGCG GCAGAGTCGC CGTCAATTTA TCGTCACGTC AATTTGCACT CCCCGATATT
CAACAGCGAA TAGAGTCGAT ATTAAGACTC ACCAAACTCC CCGCATGTCA TCTTGAATTA
GAAATAACTG AAGGTACTGT CATTAAGCAG CCGGAAACGG CGATTGTTGT CATGCAGCAA
CTGGCGAAAA TGGGCGTTAG CTTGGCACTC GATGATTTCG GCACTGGGTA CTCATCCCTT
TCATACTTAA AACGTTTCCC GATTCATACT TTAAAAATTG ATAAAGCTTT TGTTGACGAT
ATTGATAAGT CTGATCGCGA TCTCAAAATG GTCGATTCTA TTATCACTAT CGCCCATAAC
ATGGGGCTTT CTGTTGTGGG TGAAGGAGTA GAACAGACTG CGCAACTAAA CATTTTACGA
GCACTTAACT GTGAAGAGAT CCAAGGCTAT ATCTTTAGTA AGGCTATAAA AGAGACCGAG
TTTACCCTGC TACTCCAAGA AGACATGATA AAGCCAAACA CCCAAAGTAA CATTAATTAA
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| Protein sequence | MPKALFKIVL LAFFGLHAFE DVNASPFSDK SPIILQSQSF GVPQGLSQST VTSIVQDHDG
YLWIGTFNGL NRFDGKNFKH FYANDARTGL PSSFIRSLLI DEQGVLYVGT DSGLVVYDKL
QESFSHYGLS VNDSPVWSLN SSDKSLIVGT NKAIIDISNK EQTYELSKKG LSEIKKTIKV
GDDYYIRDYA GTLFELSGSE LKEIARKTMD FEQKNDTTML ISFSDGLYEY EGNEIVKVDN
RAFSLLTKYK KNIYGFTNEN VVDISNNTTI GLLSPDRPDK TSSFFATEDM FVLGSIDQGI
TIVKKVNNLV QKTNLTTDST WHLTKNTKGF LVSSDSEKIK LFDENLNLIK SFNTHTQGYK
YAVLSDDGLY FGTNTGLFLQ KDDSSKLISK NIISSLSINE NSLTIAAGTP DGKVLIIKNG
EITNSIDTKK NEPIFDVELK SDNLIYIAGQ DGLKKYENGL LENLSNEITY SIEKSDNGIY
FGTSTSLMLY NDTNKKISRI LSDNKEIYAI VDNDGFITAS SLSEVIIFEK NSKVSYILKT
SNGSQYEYNA PNGININGNT LLAGISGISL VSPKDVVSYV KKSKVNKTEI SDFLVFNIVQ
NQESNYLVQS IAASNEISLK YSDYPFSFNF ISPMSDDSST NYYYRMFGLS DIWIPANGTN
SATYTNLSPG NYTFQVYSVN SLSGEKAATK ELTVIITPPW WSSFQAKSIY AAIVLFISYL
VTKTILRRRE TQRQIVLSEE RLKLSLWGSG DEMWDWDIET GNIFRSNIWG ALEFPRDGHR
SGKSDEESNI HPMDQERVRE ALNKHFYGET DHFEAAYRVK GKDDNWVWIL DRAKIVERDE
KDNALRMTGT IKNISQFKQK EEQLKLFEKA IENISEGMFI LDSEYRFVEV NEACCKISLR
NRTDFIGNLL TFDLYPETFS TQIRTMLKQQ GRWANEVEAA RGDKSHFHME LTIDAIYDEL
GELSHYVGVF SDISRRKQQE EELRKLTNND LLTGLPNRSN LQVTLSNLVN REIAHALMVL
DLDNFKRIND SLGHQIGDTL LKLVAARIKS LLPKNTSIYR LGGDEFAIVL DKNSDISASA
AIANRIIEGL KPAFEVSNEQ LVLGLSIGIV LFPEDEQSEQ ALLRKADIAM YHAKSAGGNC
YQFYSESLNQ HAIRQLEIEN LIREGLKDDL FEVYYQPKVD LKRGKIAGME ALVRLNHPIH
GLIPPNDFIP LAEENGLIVE IGEIVLRKAC FAAQKWREQG IFSGRVAVNL SSRQFALPDI
QQRIESILRL TKLPACHLEL EITEGTVIKQ PETAIVVMQQ LAKMGVSLAL DDFGTGYSSL
SYLKRFPIHT LKIDKAFVDD IDKSDRDLKM VDSIITIAHN MGLSVVGEGV EQTAQLNILR
ALNCEEIQGY IFSKAIKETE FTLLLQEDMI KPNTQSNIN
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