Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal_2552 |
Symbol | |
ID | 4843010 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS155 |
Kingdom | Bacteria |
Replicon accession | NC_009052 |
Strand | - |
Start bp | 2989031 |
End bp | 2989915 |
Gene Length | 885 bp |
Protein Length | 294 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640119776 |
Product | dihydrodipicolinate synthase |
Protein accession | YP_001050914 |
Protein GI | 126174765 |
COG category | [E] Amino acid transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
TIGRFAM ID | [TIGR00674] dihydrodipicolinate synthase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00000411762 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATAAACG GAAGCATCGT AGCCTTAATC ACGCCAATGA ACAGTGATGG CTCAGTAGAT TTTGCAAGTC TTGAAAGGTT AGTCGAATTC CATATTGACC AAGGCACAGA TGCCATTGTG GCCGTTGGTA CTACTGGCGA GTCAGCAACT CTGCCTATGT CTGAGCATGT AACGGTCGTT TCACAAACCG TTAAATTTGC TGCGGGCCGT GTTCCTGTCA TTGGTGGCAA TGGTGCCAAT GCCACATCTG AAGCCGTTGA GCTCACCAAG TCCTTATCTA AGGTGGGTGT TGCCGCTATG CTTGGCGTAA CGCCATATTA TAATAAGCCA ACTCCTAAGG GATTGATTGC ACATTATAAA GCCGTGGCTG CCAGCACAGA TATTCCACAA ATTCTTTATA ATGTCCCTGG CCGTACTGCC GTTGATATGT TGCCAGAGAC CGTTGCCGAG TTAGTCAGCG TTAGCAACAT TATTGGCGTA AAAGAAGCGA CCGGTGACTT ATCCCGTGTA AAACGTCTGC GCGAACTGTG CGGCGACGAT TTCCTTTTGT ATAGCGGCGA TGATGCCACT GCCAGAGAGT TCTTACTCTT AGGTGGCAAT GGCGTGATTT CAGTGGCGAA CAACATAGTG CCACAAGCCT TTAAAGCTAT GTGTGATGCG GCGCTTGCCG GTAATGCTGA GCTTGCGCTG AGCATAGACA CACCACTGCG CGGTTTATAT AGCACACTCT TTTGTGAAGC CAATCCTATC CCAGTTAAAT GGGCTGCCCA TCGTATGGGT TTGATTGAAT GTGGCCATAT TCGTTTACCT TTGACTGAAC TTTCTGAGCA ATGTCATGGT CTGTTGATAG AAGCAATGAC TCGTGCCCAG ATAGAGGTTA AATAA
|
Protein sequence | MINGSIVALI TPMNSDGSVD FASLERLVEF HIDQGTDAIV AVGTTGESAT LPMSEHVTVV SQTVKFAAGR VPVIGGNGAN ATSEAVELTK SLSKVGVAAM LGVTPYYNKP TPKGLIAHYK AVAASTDIPQ ILYNVPGRTA VDMLPETVAE LVSVSNIIGV KEATGDLSRV KRLRELCGDD FLLYSGDDAT AREFLLLGGN GVISVANNIV PQAFKAMCDA ALAGNAELAL SIDTPLRGLY STLFCEANPI PVKWAAHRMG LIECGHIRLP LTELSEQCHG LLIEAMTRAQ IEVK
|
| |