Gene Sbal_2459 details

Gene Information

• Locus tag: Sbal_2459
• Symbol: tmk
• ID: 4843879
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella baltica OS155
• Kingdom: Bacteria
• Replicon accession: NC_009052
• Strand: -
• Start bp: 2872440
• End bp: 2873066
• Gene Length: 627 bp
• Protein Length: 208 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 640119682
• Product: thymidylate kinase
• Protein accession: YP_001050821
• Protein GI: 126174672
• COG category: [F] Nucleotide transport and metabolism
• COG ID: [COG0125] Thymidylate kinase
• TIGRFAM ID: [TIGR00041] thymidylate kinase

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.0022435
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCAGTTT TTGCAAAATT TATCGTTATT GAAGGTTTAG AAGGCGCGGG TAAGTCGAGT 
GCGATTAACC TTATTCGCGA CTTTATTGAA AAACATACGG GTAAAGCGCC GATCTGCACC 
CGCGAGCCGG GTGGCACGCC ACTGGCCGAA CGTATCCGTG ATTTGGTCAA AATTGCCGAT 
GCGACCGATC CCCTGTGTGA CGAGGCCGAG TGTTTACTCA TCTATGCCGC CAGAGCCCAG 
TTGGTTGCCA ATGTCATTAA GCCCGCGCTT GCAAAGGGTC AATGGGTATT GGGTGACAGA 
CACAATTTAT CGTCACTGGC CTATCAAGGT GGTGGCAGGG GCTTAATGCC GTTAGTGGAA 
GCGGTGAGCA ATGCCACCCT AAAAGGCTTT AAACCCGATC TCACTTTGTA CTTAGATTTA 
GATCCTAAGC TTGGGCTAAC CCGCGCGGCT AAACGCGGTG AGCTTGATAG AATTGAGCAA 
CAAGCGATTG ATTTCTTTGA ACGGGCTCGC GCGACTTACC TTAAACTTGC TAGCGAAGAT 
GACAGCATAG TGGTTATCGA TGCGAGTCAA ACCATGGCCG AAGTGCATAA AGATATCTTA 
GCCGTGTTAC AGGCGATGGC ATGGTAG 

 

Protein sequence

MSVFAKFIVI EGLEGAGKSS AINLIRDFIE KHTGKAPICT REPGGTPLAE RIRDLVKIAD 
ATDPLCDEAE CLLIYAARAQ LVANVIKPAL AKGQWVLGDR HNLSSLAYQG GGRGLMPLVE 
AVSNATLKGF KPDLTLYLDL DPKLGLTRAA KRGELDRIEQ QAIDFFERAR ATYLKLASED 
DSIVVIDASQ TMAEVHKDIL AVLQAMAW