Gene Sbal_2448 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal_2448 
Symbol 
ID4843563 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS155 
KingdomBacteria 
Replicon accessionNC_009052 
Strand- 
Start bp2861031 
End bp2861663 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content44% 
IMG OID640119671 
Productputative solute/DNA competence effector 
Protein accessionYP_001050810 
Protein GI126174661 
COG category[T] Signal transduction mechanisms 
COG ID[COG3109] Activator of osmoprotectant transporter ProP 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.268471 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGGAAT CAACAGAAAA GTTGACCGAC ACCAATGCAA TTTTGGCGTA TTTGTATGAA 
ACATTTCCTT TGTGCTTTAT TGCTGAAGGT GAAACTAAGC CATTAAAAAT CGGATTGTTT 
CAAGATTTGG CTGAAAGGTT GGCTGATGAT TCTAAAGTCA GTAAAACTCA GCTCAGAGTT 
GCCTTAAGAC GTTACACCAG CAGCTGGCGC TATTTGAAGT GCGTTAAAGC GGGCGCACAA 
CGCGTTAATC TGGATGGCGA ACCTTGCGGC GAGTTAGAGC AAGAGCACAT TGACCATGCT 
CAAGCCATGT TGAAAGAGAG TCAGGATAAA GCGAAAGCGA AACGTGCAGC ACTCGCACCT 
AAGCCTGCGG CGAAGAAAGC ACCTAAAAAG GTGGCTGTTC CTCAACGTGC TAAAACTGAG 
CGTCCTGCTA AGCCTGCGCC TAAAGCTGCA GCGCCAGTCG TAAATTATGT CCAAGCACAA 
TTGACGGATT TAACGAAAAA ACAACGCGTC AATGTTAAGT TAGGTATGAC ACCCGTAGCC 
GGTGTGATTA CTGATATTAA CAAGGAAGAT ATTCATGTTC AGCTTGATAG TGGCCTAACG 
ATTAAAGTTA GAGCAGAACA TATCCTGCTG TAA
 
Protein sequence
MMESTEKLTD TNAILAYLYE TFPLCFIAEG ETKPLKIGLF QDLAERLADD SKVSKTQLRV 
ALRRYTSSWR YLKCVKAGAQ RVNLDGEPCG ELEQEHIDHA QAMLKESQDK AKAKRAALAP 
KPAAKKAPKK VAVPQRAKTE RPAKPAPKAA APVVNYVQAQ LTDLTKKQRV NVKLGMTPVA 
GVITDINKED IHVQLDSGLT IKVRAEHILL