Gene Sbal_2424 details

Gene Information

• Locus tag: Sbal_2424
• ID: 4841885
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella baltica OS155
• Kingdom: Bacteria
• Replicon accession: NC_009052
• Strand: -
• Start bp: 2823132
• End bp: 2825141
• Gene Length: 2010 bp
• Protein Length: 669 aa
• Translation table: 11
• GC content: 49%
• IMG OID: 640119647
• Product: helicase c2
• Protein accession: YP_001050786
• Protein GI: 126174637
• COG category: [K] Transcription; [L] Replication, recombination and repair
• COG ID: [COG1199] Rad3-related DNA helicases

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGACTCGCT CCCGCCAACC GACATCAAAG CATGCACCCT CTAAAGAAAT AGTGGCTAAG 
CCTGCTGCCT CAAAAGGCGC TGCTGCGGTG AGCCGACTCG CGGGCGAAGT GCAACGCGCA 
TTTTTGCCCG ATGGAGTATT GTCTAAACAT ATTCAAGGGT TTAGTGCGCG AACAAGCCAA 
ATGCAGATGG CGCAGCAAGT GAGTGAGGCG ATAGCGTCTA AGAGTAATGT GGTGATTGAG 
GCGGGCACAG GGGTGGGTAA AACCTTTGCA TATTTGATCC CCGCGATATT GAGCGGCAGG 
CAAGTTATCG TCAGTACGGG CAGTAAAAAT CTGCAAGAGC AGTTGTTTTT TAAAGATTTA 
CCCGCGCTGG TCGCCATGTT GGGAATTGAG CCCAAACTGG CGCTGCTAAA GGGGCGCAAT 
AATTATCTGT GCCAGTGGCG ACTCGATAAG CAAATGAGCG AGGCGACACA TATCGATGCG 
CGTTTATTGG ATGATTTGTT GAAAATCAAT CAGTGGGCGA GCACCTGTAA AGATGGTGAT 
ATTGGCGGTT TAACCTCAGT GCCTGAGAAT TCCTCGGCGC TGCCGCTCGT GGTCAGCACT 
AAAGAAAGCT GTATTGGTAA GCGCTGCGAT TTTTATGATG CCTGCTTTAC CCGCAAGGCG 
CGCAGCCGAG CCATGGATGC CAAAATTATT GTGGTTAACC ACCATTTATT TTTTGCCGAT 
AGCGTACTGA AAGACACGGG CTTTGCTGAG TTACTGCCCG ATCCCGACGT GGTGATTTTC 
GATGAAGCGC ATTTATTACC CGATATTTGC GTTAACTATT TTGGCCAGCA ATGTTCGAGT 
CGCACTATCG ATGATTTTAT TCAAAAGCTA CTCGCTATTT ATCAAACCGA ACTCAGTGAT 
ACGGGGCAAC TCGCCCAATT TTGTCAGCGT TGCCTCGCTA AATTAAGTGA CTGGCATAAT 
CAGTTATATT CCTGCGGTGA ATCCGACTGG CGTTTAGTGC TGGGCAATAA AGCGCTCGCG 
GCGGCGTCAT GGGATTTATT AGCGGAATTA ACTGCGCTGC AGAATTTATT AATGGCCCAT 
ATTGGCCGCA GTGAATTGTT AGATGATATC GCCATCAAGT TGGCGGAGCT GAATAATAAG 
CTAAGTGTGT TTTTTAACTG CGATAATAAT CTGGCGGCCT ACAGCATTGA ATTTGGTAGT 
CGTTTTGTGG TGCTGCGAAT TTCACCCATC AATATTGCCC GTGAGTGCCA GCAGTTATTT 
GTGCCTGAAA CCAGCTGGAT ATTTACCTCG GCAACTTTGC AGGTTAACCG CAGTCTCGCC 
CATTTCGCCC GAGAAATGGG TATCGTCGAT GCGCAGCAAA GCATTCTCGA CAGTCCCTTT 
GATTATCCCC GCCAAGCGGT ATTTTGTGTG CCGAGACAAC TCGGCAGCGT GACCAATCAA 
CAGCAAGCAT TAAAACAGCT GGTGGAGGTG TGCGTGCAAG CGATAGACGC AGCGCAGGGA 
CGGACTTTTA TTCTTTTTAC CAGCCATAAA ATGCTCGAAC AAGCTGCGCT GGCACTACGA 
ACTCGCACTC AGTATCCGCT GCTGGTACAA GGTCAAGCGG GTAAACAGAG TCTGCTGACG 
AAGTTTCGCC AACTCGGCAA TGCGGTATTA CTCGGCACCA GTAGTTTTTG GGAAGGGGTG 
GATGTGCGCG GTAAATTGTT AAGTTGCGTG ATTATCGACA AATTACCTTT CGTGTCGCCC 
GATGAGCCCC TGTATCGCGC CCGAGCCGAC AATGTGAGTC GTCAGGGACT CGATCCTTTT 
ACCGAAGTGT CCTTACCTCA GGCGATTATT GCGCTGAAAC AAGGTGTTGG CCGTCTTATT 
CGCGATGAAA AAGATCGCGG TGTGCTGATC CTTTGTGATA ATCGCATTGT GAATCGCTAT 
TACGGCCAAG CCTTTTTAAA CTCACTGCCG CCAATGGCGC GCACCCGTGA CCTAGATAAA 
GCGCTGGAAT TTTTAAGACA GATCCCTTAG 

 

Protein sequence

MTRSRQPTSK HAPSKEIVAK PAASKGAAAV SRLAGEVQRA FLPDGVLSKH IQGFSARTSQ 
MQMAQQVSEA IASKSNVVIE AGTGVGKTFA YLIPAILSGR QVIVSTGSKN LQEQLFFKDL 
PALVAMLGIE PKLALLKGRN NYLCQWRLDK QMSEATHIDA RLLDDLLKIN QWASTCKDGD 
IGGLTSVPEN SSALPLVVST KESCIGKRCD FYDACFTRKA RSRAMDAKII VVNHHLFFAD 
SVLKDTGFAE LLPDPDVVIF DEAHLLPDIC VNYFGQQCSS RTIDDFIQKL LAIYQTELSD 
TGQLAQFCQR CLAKLSDWHN QLYSCGESDW RLVLGNKALA AASWDLLAEL TALQNLLMAH 
IGRSELLDDI AIKLAELNNK LSVFFNCDNN LAAYSIEFGS RFVVLRISPI NIARECQQLF 
VPETSWIFTS ATLQVNRSLA HFAREMGIVD AQQSILDSPF DYPRQAVFCV PRQLGSVTNQ 
QQALKQLVEV CVQAIDAAQG RTFILFTSHK MLEQAALALR TRTQYPLLVQ GQAGKQSLLT 
KFRQLGNAVL LGTSSFWEGV DVRGKLLSCV IIDKLPFVSP DEPLYRARAD NVSRQGLDPF 
TEVSLPQAII ALKQGVGRLI RDEKDRGVLI LCDNRIVNRY YGQAFLNSLP PMARTRDLDK 
ALEFLRQIP