| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal_2144 |
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| Symbol | |
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| ID | 4843841 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS155 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009052 |
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| Strand | - |
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| Start bp | 2489434 |
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| End bp | 2490813 |
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| Gene Length | 1380 bp |
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| Protein Length | 459 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640119360 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_001050510 |
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| Protein GI | 126174361 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00844779 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAATT CAGGCTATCA AGCCAAACGT TTAATCCAAT TGGCGCTGCC GGTGCTAATC
GCTCAGGTCA CTCAGACCAT GATGGGCTTT ATTGATACCG TTATGGCGGG CCGTGTTAGC
GCGGTTGATA TGGCCGCTGT TGCGGTTGGC ACTAGCCTTT GGTTGCCCGC TATTCTGTTC
GTCCAAGGTT TACTGATGGC TTTTACGCCT TTATTTGCCC ACTACAATGG AGCGAATAAT
CAAAAAGCCA TCCAACCTTT GGCCTTTCAA GGTGCCTATC TTGCCATCAT TGGTGGCATT
GGCGTGATGA TTTTCCTCGC ATCAGCGCCC TTTGTGCTTG GCCATATGGA TTTAGAACCC
GAATTATACC GCTTAACCAT TGGATATCTC GACGGTATTT TATGGGGTGC GCCCGCATTT
GTGCTTTATC AAGTGCTGCG CGGCTGTAGT GAAGGGATTT CTTACACGTT ACCGACTATG
GTCATTGGCT TTGTCGGCTT AGCAGTGAAC ATCCCCGCCA ACTACATCTT TATTTATGGA
CACTTTGGCG TACCTCCGAT GGGCGGTGCT GGCTGTGGTA TTGCCACCGC TTTGGTTTTT
TGGGCCATGC TGATTGCTAT GACTATTTAT ATGCAACTGC ATAAGAAATT CGCGGCCTTG
GCTCCTTTCA GTAAATTTCA TCGTCCTGAC TTTGAAACGA TGAAAAAAAT GACCAAACTC
GGCATGCCGA TAGCAATGGC GCTGTTTTTT GAAGTGAGTT TATTTGCCAT TATCGCGCTG
TTACTCGCCC CATTAGGCGC AACTGTGGTG GCAAGTCACC AGATAGCACT GAACTTTTCT
GCCATCGTAT TTATGCTGCC GTTATCGATT GGTATCGCGG TATCGATTCG AATTGGTTAC
TACTTAGGCC GGGATCGCGC CGATATTTCC GCAGTGGTTA CCAAAGTGGG TTTATGGCTG
GCGCTGTCCC TTGCATTATC AACTGCAGTC TTGACCGTCA TATTTAGATT CCAGATTGCA
GAGCTTTATA ATGGTGATCC TGAAGTTGTC GCTTTAGCTG GCAGCTTGAT GTTAATGGCG
GCACTGTATC AATTATCGGA TTCAGTCCAA GTGGTTGCCG CCGGAGCCCT ACGTGGTTAT
AAAGATACCC GCAGTGCCTT TTATATCACG CTGTTTTCCT ATTGGGGCAT AGGGATGTCA
CTCGGTTATA CCTTGGCTTA TACGGATCAT ATCGTTCCTG CCATGGGCGC CCATGGTTTC
TGGGCAGGAT TGATTGCAGG TCTCACCTCG GCGGCGCTGC TATTTTTCAT TCGACTGCGT
TATATCCAAA AACATGGCGT GCATTTAAGC CTCATCGATG GTGATAGTGT GCATCTTTGA
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| Protein sequence | MNNSGYQAKR LIQLALPVLI AQVTQTMMGF IDTVMAGRVS AVDMAAVAVG TSLWLPAILF
VQGLLMAFTP LFAHYNGANN QKAIQPLAFQ GAYLAIIGGI GVMIFLASAP FVLGHMDLEP
ELYRLTIGYL DGILWGAPAF VLYQVLRGCS EGISYTLPTM VIGFVGLAVN IPANYIFIYG
HFGVPPMGGA GCGIATALVF WAMLIAMTIY MQLHKKFAAL APFSKFHRPD FETMKKMTKL
GMPIAMALFF EVSLFAIIAL LLAPLGATVV ASHQIALNFS AIVFMLPLSI GIAVSIRIGY
YLGRDRADIS AVVTKVGLWL ALSLALSTAV LTVIFRFQIA ELYNGDPEVV ALAGSLMLMA
ALYQLSDSVQ VVAAGALRGY KDTRSAFYIT LFSYWGIGMS LGYTLAYTDH IVPAMGAHGF
WAGLIAGLTS AALLFFIRLR YIQKHGVHLS LIDGDSVHL
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