Gene Sbal_1889 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal_1889 
Symbol 
ID4842195 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS155 
KingdomBacteria 
Replicon accessionNC_009052 
Strand
Start bp2190002 
End bp2191138 
Gene Length1137 bp 
Protein Length378 aa 
Translation table11 
GC content52% 
IMG OID640119110 
Producthydrogenase (NiFe) small subunit HydA 
Protein accessionYP_001050264 
Protein GI126174115 
COG category[C] Energy production and conversion 
COG ID[COG1740] Ni,Fe-hydrogenase I small subunit 
TIGRFAM ID[TIGR00391] hydrogenase (NiFe) small subunit (hydA)
[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.118271 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACACAC ATGCAGCCCT ATATGAACAG GGAAAGGCGC GCTTAGATGC GTTACGCCAA 
TTCGCTCCCC GTCAACAACA ATCGCTGATT GAGAAGATGC AACAGCACGG CATTAGCCGC
CGTGATTTTA TGAAGTGGAG TGCCATGGTG ACGAGCATGC TCGCATTGCC GCTCCCCTTT
AGTAACTTAG TAGCCGAAGC TGCCGAATTA GCCGACCGTG TACCCTTAAT CTGGTTACAC
ATGGCCGAAT GTACTGGCTG CTCAGAATCC TTAATTCGTA CCGATACCCC CAATCTAGAT
TCGCTGATTT TCGATCATAT CTCCTTGGAA TATCACGAAA CCTTAATGGC TGCAGCGGGT
TGGCAAGCCG AAGAAAACCT CGAAAATGCA CTCGAAACCT ACAAGGGCCG CTATTTACTG
GCCGTTGAAG GGGCGATTCC AACCGCCAAT AACGGCAGTT TCCTCACTGT GGGCTGTAAA
GGCCACACAG GATTAGAAGT CATCAAACAT GCTGCAGAAG GCGCCGCCGC GATTATCTCT
GTCGGCACTT GTGCGGCGTT TGGTGGCGTG CAAGCTGCCT ATCCAAACCC AACGGGGGCG
AAAGGCGTGC ACGAAGTGGT CAGTAAACCC GTCATTAACT TAGGCGGTTG CCCACCGAGC
GAAAAGAACA TAGTCGGCAC TTTGATGTAC TTCATCATGT TCGGCAAATT ACCTGCGCTG
GATATGTTTA ACAGACCAAA ATGGGCTTAC GGCGCACGGG TACACGATAA CTGTGAACGT
CGCGGCCGCT TTGATGCCGG TGAATTCGTT GAAGAATTTG GCGATCACGG CGCGAAAGAA
GGCTACTGCC TGTATAAAGT CGGTTGTAAA GGTCCTTACA CCTACAACAA CTGCCCTACC
GAGCGCTTTA ACCATCACAC CAGCTGGCCA GTTCTCGCTG GACACGGTTG TATGGGCTGC
TCAGAACCTA ACTTCTGGGA TGACATGGCC GACTTTGAAA AACCCCTTGG CCGTCAACTC
CTCCATGGAT TGGATGCGAC CGCAGATACT ATTGGTGCGG TGATTTTAGG CGCGACTGTG
GTGGGCATTG GAGCCCATGC CGTTGCCAGT ATTTTTGCCA AACCGCTGGA GGAATAA
 
Protein sequence
MDTHAALYEQ GKARLDALRQ FAPRQQQSLI EKMQQHGISR RDFMKWSAMV TSMLALPLPF 
SNLVAEAAEL ADRVPLIWLH MAECTGCSES LIRTDTPNLD SLIFDHISLE YHETLMAAAG
WQAEENLENA LETYKGRYLL AVEGAIPTAN NGSFLTVGCK GHTGLEVIKH AAEGAAAIIS
VGTCAAFGGV QAAYPNPTGA KGVHEVVSKP VINLGGCPPS EKNIVGTLMY FIMFGKLPAL
DMFNRPKWAY GARVHDNCER RGRFDAGEFV EEFGDHGAKE GYCLYKVGCK GPYTYNNCPT
ERFNHHTSWP VLAGHGCMGC SEPNFWDDMA DFEKPLGRQL LHGLDATADT IGAVILGATV
VGIGAHAVAS IFAKPLEE