Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal_1888 |
Symbol | |
ID | 4842194 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS155 |
Kingdom | Bacteria |
Replicon accession | NC_009052 |
Strand | - |
Start bp | 2188295 |
End bp | 2189998 |
Gene Length | 1704 bp |
Protein Length | 567 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640119109 |
Product | nickel-dependent hydrogenase large subunit |
Protein accession | YP_001050263 |
Protein GI | 126174114 |
COG category | [C] Energy production and conversion |
COG ID | [COG0374] Ni,Fe-hydrogenase I large subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.261784 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCAAGC GCGTTGTTAT CGACCCTATC ACACGTATCG AGGGTCACTT ACGTATCGAA GTTGAAGTTG ATGAAAATAA CGTCATCAGC AAGGCTTGGT CATCCTCCAC ACTCTGGCGC GGTATTGAAG TCATTCTCAA GGGCCGTACG CCTATGGATG TTGGCCTTAT TGTGCAACGT ATCTGTGGTG TCTGTACCTA TTCCCACTAC CGCTGCGGCA CTGAAGCGGT TGAGAACGCT CTGGGAATTC AAATTCCGTT GAACGCAAGA TACTTGCGTT CATTGATGCA AACCTCTTTA TACATGCATG ACCATATTGT GCATTTCTAT CATCTACACG GTCTTGATTG GGTGGATGTG GTGTCTGCAC TGAGCGCCGA TCCGGCCAAA GCTGCACAAG TTGCGCTGCA ATACACAGAC AAGCCCATAG CCGCGGGTGA AGGTGATTTA AGAGCCGTGC AAGAAAGAGT CAAAGGCTTT GTCGAAACCG GTAAATTAGG CCCCTTCGCC AACGCTTATT GGGGCAATGG CACCTATAAA TTTACTCCAG AGCAAAACCT TATCGCGCTG TCTCACTACC TTAAAGCACT TGAAGTACAA CGTGTTGCGG CGGAAATGCT GGCCATCTTT GGCGGTAAAT ATCCACATCC ACAATCCGTT GTTGTCGGTG GTGTGACGTC GGTGCGTGAC ATGTTAAGCC CTGCTCGCCT GCAGGAATGG AAGCAAAAAC ATGCGACCGT GACTGACTTT ATCCTGCGTG CTTATCAAGC GGATATCGTG ATGGCGGCCG AAGCCTTTGG TACTGAGCCA AGTGTGCTGG GCGGCGTGAA TGTGAAAAAC TTCATGGCGA CCGATGACTT TGTGTTAGCC AATGGCGAAT ACATGTTCAA TCAAGGCGTG ATCATGAACG GCGACCTTGC CGGTGTCAGC GATATAAACC CAGATCTGAT TGCTGAAGAC GTTAGCCATG CTTGGTATAG CGCCGATGCG CCGCAGCATC CCTATGACGG TACAACGATT CCTAATTACA CTGGTTTTGT TGAACGCGAT ACCGTCTACG GCAAGCTGCC AACGCTGGAT GGTGATGGCA AATACTCTTG GGTGAAATCC CCCCGTTATC AAGGCGAACC TGTTGAAGTG GGTCCATTAG CCTGCCTATT GGTGAGTTAT GCCCGTGGTA ACAAAGTGGT TGTGGATTCA GTCAATGCCT TGCTCGCTCG CACTGGCTTA CCCGTTGCCG CCCTATTTAC CACTTTAGGT CGCACCGCAG CCCGTATGTT ACAGACAGTT ATCGTCGCCC AAGAAGGATT AAAAACCTTC GATGCGCTGC TGACGAATAT CCAGTCTGAT GAATCAACTT ATGTGAAACC CAATATCGAC CCGAGCAAAG AGTACATAGG TCACGCCATG ATTGAGGCGC CACGCGGCAT GTTAAGCCAC TGGATCCGCA TTAAAAATGG AGTGATAGAG AACTATCAAG CCGTAGTACC GACGACCTGG AACGCAGGAC CTGTGGATGC CAACGGTAAA ATGGGTCCCT ATGAAGCCTC TTTAATTGGC TTGAAACTGG AAGATCCTAC TAAGCCCCTT GAGGTGATAC GTATTATTCA CTCATTTGAC CCTTGCATGG CGTGTTCTGT ACACGTGATG GATTTTAAAG GTCAGGCATT GAGCGAGTTC CGTGTCAGTC CCAATGGTCA ATAA
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Protein sequence | MSKRVVIDPI TRIEGHLRIE VEVDENNVIS KAWSSSTLWR GIEVILKGRT PMDVGLIVQR ICGVCTYSHY RCGTEAVENA LGIQIPLNAR YLRSLMQTSL YMHDHIVHFY HLHGLDWVDV VSALSADPAK AAQVALQYTD KPIAAGEGDL RAVQERVKGF VETGKLGPFA NAYWGNGTYK FTPEQNLIAL SHYLKALEVQ RVAAEMLAIF GGKYPHPQSV VVGGVTSVRD MLSPARLQEW KQKHATVTDF ILRAYQADIV MAAEAFGTEP SVLGGVNVKN FMATDDFVLA NGEYMFNQGV IMNGDLAGVS DINPDLIAED VSHAWYSADA PQHPYDGTTI PNYTGFVERD TVYGKLPTLD GDGKYSWVKS PRYQGEPVEV GPLACLLVSY ARGNKVVVDS VNALLARTGL PVAALFTTLG RTAARMLQTV IVAQEGLKTF DALLTNIQSD ESTYVKPNID PSKEYIGHAM IEAPRGMLSH WIRIKNGVIE NYQAVVPTTW NAGPVDANGK MGPYEASLIG LKLEDPTKPL EVIRIIHSFD PCMACSVHVM DFKGQALSEF RVSPNGQ
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