Gene Sbal_1888 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal_1888 
Symbol 
ID4842194 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS155 
KingdomBacteria 
Replicon accessionNC_009052 
Strand
Start bp2188295 
End bp2189998 
Gene Length1704 bp 
Protein Length567 aa 
Translation table11 
GC content49% 
IMG OID640119109 
Productnickel-dependent hydrogenase large subunit 
Protein accessionYP_001050263 
Protein GI126174114 
COG category[C] Energy production and conversion 
COG ID[COG0374] Ni,Fe-hydrogenase I large subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.261784 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAAGC GCGTTGTTAT CGACCCTATC ACACGTATCG AGGGTCACTT ACGTATCGAA 
GTTGAAGTTG ATGAAAATAA CGTCATCAGC AAGGCTTGGT CATCCTCCAC ACTCTGGCGC
GGTATTGAAG TCATTCTCAA GGGCCGTACG CCTATGGATG TTGGCCTTAT TGTGCAACGT
ATCTGTGGTG TCTGTACCTA TTCCCACTAC CGCTGCGGCA CTGAAGCGGT TGAGAACGCT
CTGGGAATTC AAATTCCGTT GAACGCAAGA TACTTGCGTT CATTGATGCA AACCTCTTTA
TACATGCATG ACCATATTGT GCATTTCTAT CATCTACACG GTCTTGATTG GGTGGATGTG
GTGTCTGCAC TGAGCGCCGA TCCGGCCAAA GCTGCACAAG TTGCGCTGCA ATACACAGAC
AAGCCCATAG CCGCGGGTGA AGGTGATTTA AGAGCCGTGC AAGAAAGAGT CAAAGGCTTT
GTCGAAACCG GTAAATTAGG CCCCTTCGCC AACGCTTATT GGGGCAATGG CACCTATAAA
TTTACTCCAG AGCAAAACCT TATCGCGCTG TCTCACTACC TTAAAGCACT TGAAGTACAA
CGTGTTGCGG CGGAAATGCT GGCCATCTTT GGCGGTAAAT ATCCACATCC ACAATCCGTT
GTTGTCGGTG GTGTGACGTC GGTGCGTGAC ATGTTAAGCC CTGCTCGCCT GCAGGAATGG
AAGCAAAAAC ATGCGACCGT GACTGACTTT ATCCTGCGTG CTTATCAAGC GGATATCGTG
ATGGCGGCCG AAGCCTTTGG TACTGAGCCA AGTGTGCTGG GCGGCGTGAA TGTGAAAAAC
TTCATGGCGA CCGATGACTT TGTGTTAGCC AATGGCGAAT ACATGTTCAA TCAAGGCGTG
ATCATGAACG GCGACCTTGC CGGTGTCAGC GATATAAACC CAGATCTGAT TGCTGAAGAC
GTTAGCCATG CTTGGTATAG CGCCGATGCG CCGCAGCATC CCTATGACGG TACAACGATT
CCTAATTACA CTGGTTTTGT TGAACGCGAT ACCGTCTACG GCAAGCTGCC AACGCTGGAT
GGTGATGGCA AATACTCTTG GGTGAAATCC CCCCGTTATC AAGGCGAACC TGTTGAAGTG
GGTCCATTAG CCTGCCTATT GGTGAGTTAT GCCCGTGGTA ACAAAGTGGT TGTGGATTCA
GTCAATGCCT TGCTCGCTCG CACTGGCTTA CCCGTTGCCG CCCTATTTAC CACTTTAGGT
CGCACCGCAG CCCGTATGTT ACAGACAGTT ATCGTCGCCC AAGAAGGATT AAAAACCTTC
GATGCGCTGC TGACGAATAT CCAGTCTGAT GAATCAACTT ATGTGAAACC CAATATCGAC
CCGAGCAAAG AGTACATAGG TCACGCCATG ATTGAGGCGC CACGCGGCAT GTTAAGCCAC
TGGATCCGCA TTAAAAATGG AGTGATAGAG AACTATCAAG CCGTAGTACC GACGACCTGG
AACGCAGGAC CTGTGGATGC CAACGGTAAA ATGGGTCCCT ATGAAGCCTC TTTAATTGGC
TTGAAACTGG AAGATCCTAC TAAGCCCCTT GAGGTGATAC GTATTATTCA CTCATTTGAC
CCTTGCATGG CGTGTTCTGT ACACGTGATG GATTTTAAAG GTCAGGCATT GAGCGAGTTC
CGTGTCAGTC CCAATGGTCA ATAA
 
Protein sequence
MSKRVVIDPI TRIEGHLRIE VEVDENNVIS KAWSSSTLWR GIEVILKGRT PMDVGLIVQR 
ICGVCTYSHY RCGTEAVENA LGIQIPLNAR YLRSLMQTSL YMHDHIVHFY HLHGLDWVDV
VSALSADPAK AAQVALQYTD KPIAAGEGDL RAVQERVKGF VETGKLGPFA NAYWGNGTYK
FTPEQNLIAL SHYLKALEVQ RVAAEMLAIF GGKYPHPQSV VVGGVTSVRD MLSPARLQEW
KQKHATVTDF ILRAYQADIV MAAEAFGTEP SVLGGVNVKN FMATDDFVLA NGEYMFNQGV
IMNGDLAGVS DINPDLIAED VSHAWYSADA PQHPYDGTTI PNYTGFVERD TVYGKLPTLD
GDGKYSWVKS PRYQGEPVEV GPLACLLVSY ARGNKVVVDS VNALLARTGL PVAALFTTLG
RTAARMLQTV IVAQEGLKTF DALLTNIQSD ESTYVKPNID PSKEYIGHAM IEAPRGMLSH
WIRIKNGVIE NYQAVVPTTW NAGPVDANGK MGPYEASLIG LKLEDPTKPL EVIRIIHSFD
PCMACSVHVM DFKGQALSEF RVSPNGQ